Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_024122.1
Length=162910
Score E
Sequences producing significant alignments: (Bits) Value
seq236 118 1e-21
>seq236
Length=1144
Score = 118 bits (130), Expect = 1e-21
Identities = 200/286 (70%), Gaps = 8/286 (3%)
Strand=Plus/Plus
Query 9396 TCTTCCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGT 9455
||| || || || || ||||| ||||| || || || ||||| ||||||||||| |||||
Sbjct 802 TCTGCCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGT 861
Query 9456 ATTAATCAAAACTGGTGATACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGA 9515
| ||| || |||||||| |||| || ||||||||||| | | ||| ||| |
Sbjct 862 GCTGATCGAATGTGGTGATAGCCTGGATTCGATTAATGCCACCTCAAGCGCCATTGTGAA 921
Query 9516 TTATGTTTCCAAACGTGCTGGCATCGGATTCGATGTTGGGGCAATTCGTGGCATCGGTAG 9575
|| |||||| ||||||| || ||||| || | | || || |||| | |||||
Sbjct 922 ATACGTTTCCCAACGTGCGGGGATCGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAG 981
Query 9576 CCCTATCCGTAAAGGGGAAATGGTCCATACAGGTCTG-GTTCCATTCATCAAGTATTT-- 9632
||| || || || ||| ||||||| || ||| |||| ||| |||| ||||
Sbjct 982 CCCGATTCGCGGTGGAGAAGCTTTCCATACCGG-CTGCATTCCGTTCTACAAGCATTTCC 1040
Query 9633 -GACTGGTGCCCTGAAGTCTTGCTCTCAAGGCGGTATCCGTGGTGG 9677
||| ||| | || || |||||||| ||||| | ||||||||
Sbjct 1041 AGAC---CGCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGTGG 1083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521115457789200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |