Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq7525 102 1e-16
>seq7525
Length=4038190
Score = 102 bits (112), Expect = 1e-16
Identities = 193/279 (69%), Gaps = 4/279 (1%)
Strand=Plus/Plus
Query 183008 AAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGC 183067
|||| |||||| ||| ||||| | | || | |||||| ||| || || || ||||
Sbjct 439804 AAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 439863
Query 183068 ATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAG 183127
| | || | || ||||||||||| |||||||| || || ||||| | ||| || || |
Sbjct 439864 ACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAAACGCCCGAGG 439923
Query 183128 ATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCT 183186
| || ||||| | |||||| ||||| || ||| || || || ||||||
Sbjct 439924 AAGCGCTTGAGACGGCG-ATCTATCTGAACGATCGCTACAGTCTGGATGGGCGGGATCCG 439982
Query 183187 AACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGAT-AGAGCGTGGAAAGA 183245
||||| ||||| ||||| |||||||| || || | |||||| || || ||||| ||
Sbjct 439983 AACGGGTACGTCGGTTGCATGTGGTCGATCGCGGGCATCCACGATCAGGGC-TGGAAGGA 440041
Query 183246 AAGACCTATATTTGGAAAGATAAGATATATGAATTATGA 183284
| || ||||| || || | || ||||| |||||
Sbjct 440042 GCGCGAAATCTTTGGTAAAATTCGGTACATGAACTATGA 440080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903292390134560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |