Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq7525 102 1e-16 >seq7525 Length=4038190 Score = 102 bits (112), Expect = 1e-16 Identities = 193/279 (69%), Gaps = 4/279 (1%) Strand=Plus/Plus Query 183008 AAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGC 183067 |||| |||||| ||| ||||| | | || | |||||| ||| || || || |||| Sbjct 439804 AAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 439863 Query 183068 ATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAG 183127 | | || | || ||||||||||| |||||||| || || ||||| | ||| || || | Sbjct 439864 ACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAAACGCCCGAGG 439923 Query 183128 ATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCT 183186 | || ||||| | |||||| ||||| || ||| || || || |||||| Sbjct 439924 AAGCGCTTGAGACGGCG-ATCTATCTGAACGATCGCTACAGTCTGGATGGGCGGGATCCG 439982 Query 183187 AACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGAT-AGAGCGTGGAAAGA 183245 ||||| ||||| ||||| |||||||| || || | |||||| || || ||||| || Sbjct 439983 AACGGGTACGTCGGTTGCATGTGGTCGATCGCGGGCATCCACGATCAGGGC-TGGAAGGA 440041 Query 183246 AAGACCTATATTTGGAAAGATAAGATATATGAATTATGA 183284 | || ||||| || || | || ||||| ||||| Sbjct 440042 GCGCGAAATCTTTGGTAAAATTCGGTACATGAACTATGA 440080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903292390134560