Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq7552 450 1e-121 seq7535 138 1e-27 seq7521 132 5e-26 seq7526 107 2e-18 >seq7552 Length=2500597 Score = 450 bits (498), Expect = 1e-121 Identities = 1018/1517 (67%), Gaps = 24/1517 (2%) Strand=Plus/Plus Query 148251 AGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTC 148310 |||| || ||||||||||| |||||||| | |||||||||| || ||||| | Sbjct 1135229 AGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGAC 1135288 Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370 || |||| || ||||| || |||||||| | ||| || || || | ||||| ||||| Sbjct 1135289 GTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATC 1135348 Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430 || | ||||||||| ||||| | ||| | || || || ||||| | ||| Sbjct 1135349 GGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCC 1135408 Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTA 148490 |||| ||| || || |||| | ||||||||| |||||||||| ||||| ||| Sbjct 1135409 CAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTC 1135468 Query 148491 GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC 148550 | || ||||||||||||| |||||| || | || |||| || |||||||| Sbjct 1135469 ACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCT 1135528 Query 148551 TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG 148610 || |||||||||||||| || || ||| |||||| || ||| ||| ||| Sbjct 1135529 TCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCG 1135588 Query 148611 CTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCC 148669 ||||||||||| ||| |||| | | | ||||| ||||| | |||||| ||||| | || Sbjct 1135589 CTTTCGTACGG-ATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCC 1135647 Query 148670 AATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGATAGTGGTTGCGGT 148728 || |||| ||| || |||||| | || ||| | | ||||||| ||| | Sbjct 1135648 GATCGGCCTGTGGCGCATATTGGAGCGCTTAGC-CTCCGGCACGGGATAGTAATTGACAT 1135706 Query 148729 CGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAAT 148788 | ||||| |||| ||||||||| || ||| | | | |||| | |||| | Sbjct 1135707 CAATGATTTTGTTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGT 1135766 Query 148789 CGTAC---TTGTC---ATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACA 148842 | ||| ||||| | ||| | ||| ||||| |||||| ||||| |||||||| | Sbjct 1135767 CATACGTTTTGTCTTGCTTTAC-AAACAT--GTTCAAGGCGATCGAGGCCAGATTGCATA 1135823 Query 148843 CGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGA 148902 | || ||||||| | ||||||||| || || | ||||| ||| ||||||| Sbjct 1135824 CCGCTACCTCATCCTTCGACGAGTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGA 1135883 Query 148903 TCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACG 148962 | ||| | |||| || || || || | ||||| || ||||||||||||||||||| Sbjct 1135884 TGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACG 1135943 Query 148963 GTCCGCCAGTTTCCACCTGCGTTTCCACTAT--GAACCGATGCAGGTCCTGCGCGCGCAC 149020 || |||| ||||||||||||| ||| | || || | | ||| |||||||| ||| Sbjct 1135944 GTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCA--CAGATCCTGCGCCTTCAC 1136001 Query 149021 TTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCC 149080 ||| || |||||||||| | |||||| || |||||| ||||||| | ||||| Sbjct 1136002 CTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCC 1136061 Query 149081 GTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGC 149140 || || || ||||| || | |||||||||||| || ||||| ||| ||| Sbjct 1136062 CCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGC 1136121 Query 149141 GTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTT 149200 | ||| |||| ||| ||||| || || | |||||| ||||| | | ||| || || Sbjct 1136122 CTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCG 1136181 Query 149201 GCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCA 149260 | || || ||| |||| ||| | ||| | |||||| || | ||||| Sbjct 1136182 GACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCA 1136241 Query 149261 CGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCG 149317 |||||| | || | |||| || || ||| ||||| ||||| ||||||| || Sbjct 1136242 CGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCG 1136301 Query 149318 CACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGA 149377 || | ||||| | || || | ||| || | | || | | | | ||||| ||| Sbjct 1136302 TGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACC 1136361 Query 149378 GCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTA 149437 | ||| | || ||| || | ||||||||| | |||||||| ||| | | Sbjct 1136362 GGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGA 1136421 Query 149438 CTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTT 149497 |||||| || || || | ||||| |||||||||||| ||||| || Sbjct 1136422 CTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGA 1136481 Query 149498 CATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGT 149557 |||||||| ||| ||||| || | | || ||| | ||| | ||||| ||||| || Sbjct 1136482 CATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACATAGT 1136541 Query 149558 GGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTC 149617 || |||||| ||||| || || | || || | ||| | ||||| | || Sbjct 1136542 TGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGCATC 1136601 Query 149618 CATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGC 149677 ||||| |||||||||||||| || || |||||||||||||| ||||| || ||||| | Sbjct 1136602 GATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGAC 1136661 Query 149678 CACTTTGTTTCC--AATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTAC 149735 | || || || || || |||||||| ||| | || || |||| || || Sbjct 1136662 GA--TTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAG 1136719 Query 149736 TTGTAGTCAAAGTCGCG 149752 ||||| | |||||||| Sbjct 1136720 TTGTACCCGAAGTCGCG 1136736 >seq7535 Length=3646130 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || || || || || ||| | | | ||||| |||| Sbjct 876059 ATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCA-TCCTCCAGCT 876117 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || ||| | || || |||||||| || || ||||| || |||||||| ||||| Sbjct 876118 GCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCT 876177 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| ||| || | ||||| || |||| ||||| ||| || |||| Sbjct 876178 TCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCGAGGGTGATGGTCTTTCCGG 876237 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||||||||| |||||||||||||| Sbjct 876238 TCAGAGTTTTCACGAAAATCTGCAT 876262 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || || || || || ||| | | | ||||| |||||||| || Sbjct 875838 GTAGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCA-TCCTCCAGCTGCTTTCC 875896 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || || ||||| || |||||||| |||||| ||| Sbjct 875897 GGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTT 875956 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||| || | ||||| || || | ||||| ||| || ||||||||||| Sbjct 875957 CACATTCTCAATCGTATCCGATGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAGAGT 876016 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| Sbjct 876017 TTTCACGAAAATCTGCAT 876034 >seq7521 Length=12184106 Score = 132 bits (146), Expect = 5e-26 Identities = 145/190 (76%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| ||| | ||| ||| | ||||| ||||||||||| ||| | || Sbjct 9381158 TTCTGAATGTTGTAGTCGGAGAGAGTGCGACCA-TCCTCCAGCTGCTTGCCGGCGAAGAT 9381216 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || |||||||| || || || |||||||||||||| ||||||| ||| | | ||| Sbjct 9381217 CAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTC 9381276 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | ||||| || || | |||| ||| |||||||| || ||||| ||||| Sbjct 9381277 GATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAA 9381336 Query 133652 AATCTGCATG 133661 |||||||||| Sbjct 9381337 AATCTGCATG 9381346 Score = 129 bits (142), Expect = 6e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || ||||| ||| || |||| | | | ||||| |||| Sbjct 8321321 ATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCA-TCCTCCAGCT 8321263 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | || || |||||||| || || ||||| ||||||||||| ||||| Sbjct 8321262 GCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCTTCCTTGTCCTGGATCT 8321203 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||| | ||| || | |||||| || || | ||| | ||| || || | Sbjct 8321202 TCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCG 8321143 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || ||||| ||||| |||||||| Sbjct 8321142 TGAGGGTTTTGACGAAGATCTGCAT 8321118 >seq7526 Length=6110091 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 |||||| |||||||| |||||| || ||||||||||| ||||||||||| || || Sbjct 4673132 CAGGCAGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGT 4673191 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 || || ||||| | ||| | |||| | |||| || ||||| ||||| || || Sbjct 4673192 GAGTCCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTACCGCTGAA 4673251 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818 ||| | ||||| || || || || || | |||||| | || | ||| ||||||| Sbjct 4673252 GAAGATACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGCCTTCTTGCT 4673311 Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCA 120865 |||||| |||| ||||| || ||||| ||||||||||| Sbjct 4673312 CGAGATCCAGTTCAGCGCCCAGTCCGCCTTCCGCTTCACGCACGGCA 4673358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483357224122040