Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq7535 95.1 3e-14
seq7521 87.8 4e-12
>seq7535
Length=3646130
Score = 95.1 bits (104), Expect = 3e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || ||||| || ||||| ||||||| || || || || | ||
Sbjct 876019 AAAACTCTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCATCGGATACGATTGAGAAT 875960
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || ||||| ||| || || | || ||||||
Sbjct 875959 GTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTC 875900
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| |||| ||||| | || || | || || ||| ||||||| ||||||
Sbjct 875899 GCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAACATCCAGAAGGAGTCT 875840
Query 206365 ACTCTTCACCTTGTT 206379
|||||||| || |||
Sbjct 875839 ACTCTTCATCTGGTT 875825
Score = 93.3 bits (102), Expect = 1e-13
Identities = 77/94 (82%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822
||| || |||||||||||||| ||||||| |||||||| | || || | ||||| ||
Sbjct 875825 AACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTC 875884
Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
||||||||||||||||||||| || || || |||
Sbjct 875885 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGA 875918
>seq7521
Length=12184106
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| ||||| || || || || || | || || || || ||
Sbjct 8321121 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTCGGAT 8321180
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || |||||||| ||| || ||
Sbjct 8321181 ACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAAGGAATCCCGCCAGATCAGCAG 8321240
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| |||| ||||| | || || |||| |||||| ||
Sbjct 8321241 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTACAACATC 8321300
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || ||||| || ||
Sbjct 8321301 CAGAAGGAGTCGACCCTTCATCTGGT 8321326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181661490186841
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |