Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq236 203 4e-47 >seq236 Length=1144 Score = 203 bits (224), Expect = 4e-47 Identities = 251/342 (73%), Gaps = 6/342 (2%) Strand=Plus/Plus Query 41180 CCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAGTG 41239 |||||||| || ||| |||| |||||||| || || |||||||| | || || || Sbjct 806 CCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGCTG 865 Query 41240 ATTGAATCAGGTGATTCCCTGGGTTCTCTGAATGCTGTAACCTCT---GCGATCGTGAAG 41296 || |||| |||||| ||||| ||| | ||||| ||||| || || ||||| Sbjct 866 ATCGAATGTGGTGATAGCCTGGATTCGATTAATGCC---ACCTCAAGCGCCATTGTGAAA 922 Query 41297 TATATTTCACAACGTGCTGGTATCGGTGTTAATGCTGGACACATTCGCGCAATGGGTTCT 41356 || |||| |||||||| || ||||| | || || || | ||| || || ||||| Sbjct 923 TACGTTTCCCAACGTGCGGGGATCGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAGC 982 Query 41357 AAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAACATATTCAG 41416 || || ||||| ||||| | ||||| ||| || ||||||| || ||| | ||| Sbjct 983 CCGATTCGCGGTGGAGAAGCTTTCCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAG 1042 Query 41417 ACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGTATTAT 41476 || || || |||||||| || || || ||||| |||||||||||||| ||||||| || Sbjct 1043 ACCGCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTAC 1102 Query 41477 CCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAA 41518 ||||| |||||| ||||||| |||| ||||||||| |||||| Sbjct 1103 CCGATGTGGCATCTGGAAGTCGAAAGCCTGCTGGTGCTGAAA 1144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569944235349960