Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_025414.1
Length=178171
Score E
Sequences producing significant alignments: (Bits) Value
seq236 203 4e-47
>seq236
Length=1144
Score = 203 bits (224), Expect = 4e-47
Identities = 251/342 (73%), Gaps = 6/342 (2%)
Strand=Plus/Plus
Query 41180 CCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAGTG 41239
|||||||| || ||| |||| |||||||| || || |||||||| | || || ||
Sbjct 806 CCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGCTG 865
Query 41240 ATTGAATCAGGTGATTCCCTGGGTTCTCTGAATGCTGTAACCTCT---GCGATCGTGAAG 41296
|| |||| |||||| ||||| ||| | ||||| ||||| || || |||||
Sbjct 866 ATCGAATGTGGTGATAGCCTGGATTCGATTAATGCC---ACCTCAAGCGCCATTGTGAAA 922
Query 41297 TATATTTCACAACGTGCTGGTATCGGTGTTAATGCTGGACACATTCGCGCAATGGGTTCT 41356
|| |||| |||||||| || ||||| | || || || | ||| || || |||||
Sbjct 923 TACGTTTCCCAACGTGCGGGGATCGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAGC 982
Query 41357 AAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAACATATTCAG 41416
|| || ||||| ||||| | ||||| ||| || ||||||| || ||| | |||
Sbjct 983 CCGATTCGCGGTGGAGAAGCTTTCCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAG 1042
Query 41417 ACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGTATTAT 41476
|| || || |||||||| || || || ||||| |||||||||||||| ||||||| ||
Sbjct 1043 ACCGCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTAC 1102
Query 41477 CCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAA 41518
||||| |||||| ||||||| |||| ||||||||| ||||||
Sbjct 1103 CCGATGTGGCATCTGGAAGTCGAAAGCCTGCTGGTGCTGAAA 1144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569944235349960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |