Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_025437.1 Length=169062 Score E Sequences producing significant alignments: (Bits) Value seq236 122 9e-23 >seq236 Length=1144 Score = 122 bits (134), Expect = 9e-23 Identities = 256/379 (68%), Gaps = 2/379 (1%) Strand=Plus/Minus Query 142429 TTTCAGAACCAACAGGTTCTCTACTTCTAAGTGCCACATCGGATAATACGCTGTAGCAGC 142488 |||||| |||| |||| | || ||||| | ||||||||||| || || || ||||| Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085 Query 142489 ACCACCACGAATACCACCTTGAGAACAAGATTTTACTGCAGTTTGGAAATGTTTCCAGAA 142548 ||||||||| | || || ||||| || |||||||| || || |||||||| || |||| Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025 Query 142549 TGGAATAACACCCGTATGTCGAACTTCACCCATACCAATCTTAGAACCTTCTGCACGAAG 142608 ||||| || ||||| | |||| || | |||| ||| ||||| | Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGAT 965 Query 142609 CATACCAACGTTGATACCGATACCAGCTCGTTTAGAAATATATTCAATAATTGATGCTGA 142668 || ||||||| ||||| || || |||| |||| |||| | ||| | ||| Sbjct 964 GCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGA 905 Query 142669 AGTTTTGTTAATAGATTTTAACGAATCACCGGCTTCAATAACTACACAACTAGAGAACTG 142728 || ||||| || | | |||||| ||| || | ||||| |||||| Sbjct 904 GGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTG 845 Query 142729 GCGAGTTGGAGTACGAGCACCTGCCATAATTGGGGTTGGCAATGAAA-CTTGATGAGTAG 142787 || ||||| ||||| | || | ||| ||||| || |||| |||| |||| | |||| Sbjct 844 ACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAG-GTAG 786 Query 142788 AAACGGCATCATAAAAACG 142806 ||| ||| ||||| ||||| Sbjct 785 AAATGGCGTCATAGAAACG 767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540799268781520