Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_025452.1
Length=155346
Score E
Sequences producing significant alignments: (Bits) Value
seq236 129 6e-25
>seq236
Length=1144
Score = 129 bits (142), Expect = 6e-25
Identities = 218/313 (70%), Gaps = 2/313 (1%)
Strand=Plus/Minus
Query 26969 TGCCACAGAGGGATGTACCCTGTCGCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGAC 27028
||||||| ||| | || || || ||||| || || | ||||||||||||||| ||
Sbjct 1113 TGCCACATCGGGTAGAACAACGTGGCAGCACCACCACGCACGCCGCCCTGAGAGCAGGAT 1054
Query 27029 TTGAGCGCCCCAGTGAGATACTTGATGAACGGGATCAGGCCTGTATGAACCATCTCTCCG 27088
|| | || || || |||| |||||| || ||| ||||| | |||||
Sbjct 1053 TTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATGCAGCCGGTATGGAAAGCTTCTCCA 994
Query 27089 CCGCGAATAGGACTACCAATACCACGGATT-GCCCCGAAGTCAAAACCGATACCAGCGCG 27147
|||||||| || ||||| | ||||||| | |||| || | ||||| || || ||
Sbjct 993 CCGCGAATCGGGCTACCCAACGCACGGATGCGGCCCGC-GTTGATGCCGATCCCCGCACG 935
Query 27148 TTTGGACACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACC 27207
|| ||| || || | || |||| | | || || || || || |||||| | |||||
Sbjct 934 TTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCATTAATCGAATCCAGGCTATCACC 875
Query 27208 AGTCTTGATCAACACACATGAGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGAT 27267
| | ||||| |||||| ||||||||||||||||| || ||||| || || | ||||||
Sbjct 874 ACATTCGATCAGCACACAGGAGCTGAACTGACGGGTTGGCGTACGCACGCCAGACATGAT 815
Query 27268 CGGGGTTGGAAGA 27280
|| || || |||
Sbjct 814 TGGCGTAGGCAGA 802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496913841022960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |