Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_025452.1 Length=155346 Score E Sequences producing significant alignments: (Bits) Value seq236 129 6e-25 >seq236 Length=1144 Score = 129 bits (142), Expect = 6e-25 Identities = 218/313 (70%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 26969 TGCCACAGAGGGATGTACCCTGTCGCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGAC 27028 ||||||| ||| | || || || ||||| || || | ||||||||||||||| || Sbjct 1113 TGCCACATCGGGTAGAACAACGTGGCAGCACCACCACGCACGCCGCCCTGAGAGCAGGAT 1054 Query 27029 TTGAGCGCCCCAGTGAGATACTTGATGAACGGGATCAGGCCTGTATGAACCATCTCTCCG 27088 || | || || || |||| |||||| || ||| ||||| | ||||| Sbjct 1053 TTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATGCAGCCGGTATGGAAAGCTTCTCCA 994 Query 27089 CCGCGAATAGGACTACCAATACCACGGATT-GCCCCGAAGTCAAAACCGATACCAGCGCG 27147 |||||||| || ||||| | ||||||| | |||| || | ||||| || || || Sbjct 993 CCGCGAATCGGGCTACCCAACGCACGGATGCGGCCCGC-GTTGATGCCGATCCCCGCACG 935 Query 27148 TTTGGACACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACC 27207 || ||| || || | || |||| | | || || || || || |||||| | ||||| Sbjct 934 TTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCATTAATCGAATCCAGGCTATCACC 875 Query 27208 AGTCTTGATCAACACACATGAGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGAT 27267 | | ||||| |||||| ||||||||||||||||| || ||||| || || | |||||| Sbjct 874 ACATTCGATCAGCACACAGGAGCTGAACTGACGGGTTGGCGTACGCACGCCAGACATGAT 815 Query 27268 CGGGGTTGGAAGA 27280 || || || ||| Sbjct 814 TGGCGTAGGCAGA 802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496913841022960