Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq7552 349 3e-91 seq7517 109 5e-19 seq7521 96.9 3e-15 seq7535 95.1 1e-14 seq7526 91.5 1e-13 >seq7552 Length=2500597 Score = 349 bits (386), Expect = 3e-91 Identities = 1009/1535 (66%), Gaps = 32/1535 (2%) Strand=Plus/Plus Query 146890 TGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAA 146949 || || ||||| || |||||||||| |||||| || || || || || ||| | Sbjct 1135235 TGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTAC 1135294 Query 146950 GGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCC 147009 ||||| || || ||||| ||||| | ||||| ||||||| || || ||||| ||| Sbjct 1135295 GGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCC 1135354 Query 147010 ACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCC 147069 | || || ||||| || | |||| | ||| || |||||||| ||||| | Sbjct 1135355 AACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTC 1135414 Query 147070 CACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 |||| || || | ||||||||| |||||||| | | || || | ||| Sbjct 1135415 CACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGA 1135474 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 ||||| || |||| ||| || || || ||||| |||||||| || || ||| Sbjct 1135475 CTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGC 1135534 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249 || || ||||| ||||||||| ||||| | ||||| || |||||||| ||| Sbjct 1135535 GCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCG 1135594 Query 147250 TAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 || || ||| |||| || | || |||||||||| ||||| | |||| ||||| || Sbjct 1135595 TACGG-ATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGG 1135653 Query 147309 TCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAAT 147368 | || ||| |||||| || || | |||||||| ||| |||||| || Sbjct 1135654 CCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGAT 1135713 Query 147369 CTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGT 147428 ||||| || || ||| ||| |||| | | || || || | || ||||| || Sbjct 1135714 TTTGTTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGT 1135773 Query 147429 CCCGTCTT-CGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCG 147487 ||||| | || || || ||||| |||||| || ||||||||||| || || Sbjct 1135774 TTTGTCTTGCTTTACAAAC--AT--GTTCAAGGCGATCGAGGCCAGATTGCATACCGCTA 1135829 Query 147488 TCTCTTCGG-CGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACT 147546 ||| || || || ||||| || ||||| | ||||| |||| ||||| ||| Sbjct 1135830 CCTCATCCTTCGACGA-GTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATGGTG 1135888 Query 147547 CCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 147606 || | ||| ||||| || ||||| |||||||| || || ||| | |||||||||||| || Sbjct 1135889 CCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACG 1135948 Query 147607 CCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGC 147663 ||||| || || |||| ||| | ||| ||||| ||| |||||||| |||| || Sbjct 1135949 CCGGTTTCCACCTGCGATTCGATGATCGCAAACC---ACAGATCCTGCGCCTTCACCTGC 1136005 Query 147664 TGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAG 147723 || | |||| ||||| || ||||||| | ||||| | ||| ||||| ||||| || Sbjct 1136006 CGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAG 1136065 Query 147724 CAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTA 147783 || | || |||||||| | ||||| |||||||| |||||| |||| ||| | Sbjct 1136066 GTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGCCTCC 1136125 Query 147784 ACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAA 147843 || || |||| ||||| ||||| | ||| || ||||| | | || || || | Sbjct 1136126 ACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACC 1136185 Query 147844 TCCTCGGCGCCCATGTTGCGTTTCAAATTAAG-CACGCTATAGATGTCGGCGTGCCAGGG 147902 ||||| ||| |||| |||| || || || | | | || || | ||||| || Sbjct 1136186 TCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGA-ATATATCACCATGCCACGG 1136244 Query 147903 TTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGCGCAC 147959 || | |||| ||| | || || ||| || || ||||| ||||| | || | Sbjct 1136245 CTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGC 1136304 Query 147960 CATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT---GGA 148016 | | ||||| | ||||||| ||| || |||| ||| ||| | | ||||| || ||| Sbjct 1136305 CGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGA 1136364 Query 148017 ATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTA 148076 ||| | | || || || | ||||||||| | || ||||| ||| | | Sbjct 1136365 ---GATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGA 1136421 Query 148077 CTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTT 148136 |||||| || || || | || || ||||||||| || ||||| || || Sbjct 1136422 CTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATC--TTCG 1136479 Query 148137 GAC---GCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAG 148193 ||| | ||| || || || || | | || ||| | | || |||||| || | Sbjct 1136480 GACATGGTCAA-CAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACAT 1136538 Query 148194 GGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTC 148253 || || ||||| ||||| | | || || || ||||| || || | Sbjct 1136539 AGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGC 1136598 Query 148254 TTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTC 148313 |||||||| ||||| || ||||| | || |||||||| ||||||||||| || || || Sbjct 1136599 ATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTC 1136658 Query 148314 GGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTA 148373 | | | || |||||||| || | ||| ||| | |||||| | || || || Sbjct 1136659 GACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATA 1136718 Query 148374 CTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 ||||| | || || | |||||| |||||||| Sbjct 1136719 GTTGTACCCGAAGTCGCGATCGTAAATGATGGCCG 1136753 >seq7517 Length=11427604 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || |||||||||||| || |||||| ||||| Sbjct 2898720 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCTTCC 2898661 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| ||||||| |||| | |||||| ||||||||||| ||||| || || || Sbjct 2898660 AGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 2898601 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || |||| | || | || || | |||||| || || | ||| | || || Sbjct 2898600 ATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTG 2898541 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 |||||||| || || | ||| ||||||||| Sbjct 2898540 CCAGTCAGCGTCTTCACGAAGATCTGCATG 2898511 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| || |||||| ||||| ||||| ||||||| Sbjct 2898933 GACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCTTCCAGCTGCTTACCGGCG 2898874 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | |||||| ||||||||||| ||||| || || || || || |||| Sbjct 2898873 AAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 2898814 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | |||||| || || | ||| | || || |||||||| || || Sbjct 2898813 TTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTC 2898754 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 2898753 ACGAAGATCTGCATG 2898739 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || |||||||||||| || ||||| ||||| Sbjct 2898492 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCTTCC 2898433 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| ||||||| |||| | |||||| ||||||||||| ||||| || || || Sbjct 2898432 AGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 2898373 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || |||| | || | || || | |||||| || || | ||| | || || Sbjct 2898372 ATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTG 2898313 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | ||| |||||||| Sbjct 2898312 CCAGTCAGCGTCTTCACGAAGATCTGCAT 2898284 >seq7521 Length=12184106 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||||| |||| ||| | | | ||||| || || |||||||||||| || || Sbjct 8321338 CGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTG 8321279 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || ||| || ||||| || |||| |||| |||||||| |||||||| || || ||| Sbjct 8321278 CGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCT 8321219 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || || || |||| | || | ||||| | ||||| || || | Sbjct 8321218 TCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGG 8321159 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || ||||| || || ||||| | ||| |||||||| Sbjct 8321158 GTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 8321118 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 131936 TTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGATT 131995 || ||||||||||||||| | || || ||| || ||||| || |||| |||| Sbjct 9381158 TTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATC 9381217 Query 131996 AGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCC 132055 |||||||| |||||||| || |||||||| || || || ||| |||| | || Sbjct 9381218 AGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCG 9381277 Query 132056 ACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAA 132115 | || || | ||||| || || | || | || || || || || ||||| | |||| Sbjct 9381278 ATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAA 9381337 Query 132116 ATCTGCATG 132124 ||||||||| Sbjct 9381338 ATCTGCATG 9381346 >seq7535 Length=3646130 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| ||| | | ||||| || || ||||| ||||| || ||| Sbjct 875813 ACGCAGACGAAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTCCGACAGGGT 875872 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| || ||||| || |||| |||| |||||||| |||||||| || || || Sbjct 875873 GCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCC 875932 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || |||| | || | ||||| | ||||| ||||| | Sbjct 875933 CTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACTTCCAG 875992 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || ||||||||||| | |||||||||||| Sbjct 875993 GGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 876034 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| ||| | | | ||||| || || ||||| ||||| || ||| Sbjct 876041 ACGCAGACGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGT 876100 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| || ||||| || || | |||| |||||||| |||||||| || || || Sbjct 876101 GCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCC 876160 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || |||| | || | ||||| | ||||| || |||| Sbjct 876161 CTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCGAG 876220 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || ||||||||||| | |||||||||||| Sbjct 876221 GGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 876262 >seq7526 Length=6110091 Score = 91.5 bits (100), Expect = 1e-13 Identities = 262/397 (66%), Gaps = 7/397 (2%) Strand=Plus/Minus Query 46776 AAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAGCGCATG 46835 ||||| | ||||| |||| |||||| |||| ||| |||| | | |||||| | Sbjct 4673341 AAGGCGGACTGGGCGCTGAACTGGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTC 4673282 Query 46836 GTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTTTAC 46895 ||||||||||| || || || | || || || || || ||||| || || | Sbjct 4673281 GTGGCATTCGCTGCGGTTGAGGGTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGG 4673222 Query 46896 ATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGAC 46955 | || | ||| | |||||||| || || ||| |||||| |||||||||||||| Sbjct 4673221 CTGAAGAAGCGTGGCCTGATGCCGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGAC 4673162 Query 46956 GAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAGACGCGCGTGAATGAGAAATTA 47015 ||||| || ||| |||||||| || || | |||| | ||| | || | Sbjct 4673161 GAAGGGCTGCACTGCGACTTTGCCTGCCTGATGTTCAAGTATCTGGTGCAGAAGCCGTCG 4673102 Query 47016 AACTCGGA-CACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTT 47074 || ||| | || | ||| || | | || ||||| ||||| ||||||| | Sbjct 4673101 AA---GGAGCGCGTGACGGAG-ATCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCT 4673046 Query 47075 TACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATA 47133 || ||| ||||| || | |||||||||||||| | ||| |||| | || | Sbjct 4673045 GACGAAGGCACTGCCGGTGGATATGCTGGGCATGAACTGTGA-TCTGATGTCGCAGTACA 4672987 Query 47134 TTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 47170 ||||||||||||| |||||| || || | |||| || Sbjct 4672986 TTGAGTTTGTGGCCGATCGTTTGCTGCTCGAGCTGGG 4672950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476548519669560