Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq7552 93.3 4e-14 >seq7552 Length=2500597 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 5401 TTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCCACA 5460 ||||| || || ||||| | ||| || ||| ||||| ||| ||||| || || |||||| Sbjct 330345 TTGAACAGTACAACTCCGACGTTACCCCGGTAGTCCTCGTCGACGACACCGGCGCCCACA 330286 Query 5461 TCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCCGTAT 5520 || | |||||| || || || | |||||| | || ||||| || || ||||| || | Sbjct 330285 TCGATGAAGTTTTTCACGGCCAAACCGGAACGTGGAGCCACCCGGCCATAGCATCCTTCC 330226 Query 5521 GGCGGGTGGATCTGCAGATCGGTCAGCACTACC-GCGCGCCCCATCGGCGGCAAGGTGTA 5579 ||| |||| ||| | ||||||| ||| | | | ||||| | || | ||||| Sbjct 330225 GGCACCTGGACCTGGATGTCGGTCATCACGAGCTGTTTGCCCCGA-GCAGGGACCGTGTA 330167 Query 5580 GTCGTAAGCGCTG 5592 |||||||||||| Sbjct 330166 ATCGTAAGCGCTG 330154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447752307229560