Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 86.0 6e-12
>seq7552
Length=2500597
Score = 86.0 bits (94), Expect = 6e-12
Identities = 344/536 (64%), Gaps = 18/536 (3%)
Strand=Plus/Plus
Query 136638 CACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTT 136697
||| || || ||||| | ||| |||| || || || | ||||||||||||||| || ||
Sbjct 1134895 CACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGCCAGTTTT 1134954
Query 136698 TAAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGC 136757
|| ||| ||| |||| ||| ||| || || | || | |||| | || || ||
Sbjct 1134955 CAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGC 1135014
Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817
||| || || | |||||| ||||||||| | | || || ||||||||||| ||
Sbjct 1135015 GACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGGCCATTTT 1135074
Query 136818 CAATAGTACTTTTTG--CTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGC 136875
| | || |||| | || ||||| | ||||| | || || | | ||
Sbjct 1135075 GAT--GCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCGAATTTCCTGC 1135132
Query 136876 GGAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTT---TCATCATG--- 136929
|| || | | || || || | ||||| ||||| | |||| || |||||
Sbjct 1135133 GGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCATGTCG 1135192
Query 136930 AGATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACT 136989
||||| | | |||| || | | | | ||||| || || || ||
Sbjct 1135193 AGATCCCACAGACCCATGTTGGTC------AAATCCTGCAGAAGATGATGGTTCACCACC 1135246
Query 136990 TGATATTCGCCCGATAGCACTCTGCGTAC-GTACAGATTACTAGTGAACGGCTCGAACGA 137048
|| | |||||||| ||||| | || || ||| | || ||| |||||||||||||
Sbjct 1135247 TGGAACTCGCCCGACAGCACGC-GCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGA 1135305
Query 137049 TTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGA 137108
||| ||||| || | ||| ||||| || | || |||||||| || | || || ||
Sbjct 1135306 TTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGA 1135365
Query 137109 ATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGAT 137164
||| || | ||||| ||| | | || ||| | ||| ||||||||||||||
Sbjct 1135366 ATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGAT 1135421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445035864522720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |