Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq7552 86.0 6e-12 >seq7552 Length=2500597 Score = 86.0 bits (94), Expect = 6e-12 Identities = 344/536 (64%), Gaps = 18/536 (3%) Strand=Plus/Plus Query 136638 CACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTT 136697 ||| || || ||||| | ||| |||| || || || | ||||||||||||||| || || Sbjct 1134895 CACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGCCAGTTTT 1134954 Query 136698 TAAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGC 136757 || ||| ||| |||| ||| ||| || || | || | |||| | || || || Sbjct 1134955 CAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGC 1135014 Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817 ||| || || | |||||| ||||||||| | | || || ||||||||||| || Sbjct 1135015 GACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGGCCATTTT 1135074 Query 136818 CAATAGTACTTTTTG--CTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGC 136875 | | || |||| | || ||||| | ||||| | || || | | || Sbjct 1135075 GAT--GCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCGAATTTCCTGC 1135132 Query 136876 GGAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTT---TCATCATG--- 136929 || || | | || || || | ||||| ||||| | |||| || ||||| Sbjct 1135133 GGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCATGTCG 1135192 Query 136930 AGATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACT 136989 ||||| | | |||| || | | | | ||||| || || || || Sbjct 1135193 AGATCCCACAGACCCATGTTGGTC------AAATCCTGCAGAAGATGATGGTTCACCACC 1135246 Query 136990 TGATATTCGCCCGATAGCACTCTGCGTAC-GTACAGATTACTAGTGAACGGCTCGAACGA 137048 || | |||||||| ||||| | || || ||| | || ||| ||||||||||||| Sbjct 1135247 TGGAACTCGCCCGACAGCACGC-GCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGA 1135305 Query 137049 TTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGA 137108 ||| ||||| || | ||| ||||| || | || |||||||| || | || || || Sbjct 1135306 TTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGA 1135365 Query 137109 ATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGAT 137164 ||| || | ||||| ||| | | || ||| | ||| |||||||||||||| Sbjct 1135366 ATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGAT 1135421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445035864522720