Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq7517 147 2e-30 seq7525 109 5e-19 seq7535 105 6e-18 seq7521 104 2e-17 >seq7517 Length=11427604 Score = 147 bits (162), Expect = 2e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || || || |||||| || |||||||| |||| |||||| || |||| ||| Sbjct 2898720 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCTTCC 2898661 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||||||||| || || ||||| |||||||| || | ||||| || |||||||||| | Sbjct 2898660 AGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 2898601 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | |||||| || || ||||||| |||||| || || Sbjct 2898600 ATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTG 2898541 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || ||||| || |||||||| Sbjct 2898540 CCAGTCAGCGTCTTCACGAAGATCTGCAT 2898512 Score = 143 bits (158), Expect = 2e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| |||||| || |||| |||||||||||||| || || Sbjct 2898931 CTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCTTCCAGCTGCTTACCGGCGAA 2898872 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| |||||||| || | ||||| || |||||||||| |||||| ||||| | Sbjct 2898871 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 2898812 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||||| |||||| || || || |||| || ||||| Sbjct 2898811 CTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCAC 2898752 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 2898751 GAAGATCTGCAT 2898740 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || || || |||||| || |||||||| |||| || || || |||| ||| Sbjct 2898492 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCTTCC 2898433 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||||||||| || || ||||| |||||||| || | ||||| || |||||||||| | Sbjct 2898432 AGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 2898373 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | |||||| || || ||||||| |||||| || || Sbjct 2898372 ATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTG 2898313 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 || |||| || ||||| || |||||||| || Sbjct 2898312 CCAGTCAGCGTCTTCACGAAGATCTGCATCCT 2898281 >seq7525 Length=4038190 Score = 109 bits (120), Expect = 5e-19 Identities = 205/296 (69%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 44106 GAGACGGCCTCCACCCATGATCCTTTGTGGAACGCTGCCCAAACACAACTGTTGCGAGAA 44165 ||||||||| || ||||| | |||||||| | ||||| || || || || Sbjct 439794 GAGACGGCCAAAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAG 439853 Query 44166 GGTAAAATGCACCAATACATGCGTATGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAA 44225 || || |||||| | | |||| ||||| ||| ||| ||||| |||||||| || || Sbjct 439854 GGCAAGATGCACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAA 439913 Query 44226 GATGCGCAAACC-GCGCTCGTTCATGCCATCTATCTGAACGACAAGTACAGTTTGGACGG 44284 | || | | ||||| | || |||||||||||||| |||||| |||| || Sbjct 439914 -ACGCCCGAGGAAGCGCTTGAGACGGCGATCTATCTGAACGATCGCTACAGTCTGGATGG 439972 Query 44285 TCGCGACCCCAACGGGTACGTAGGATGTATGTGGTCCATTTGCGGTGTCCACGA-CAGGG 44343 || || || ||||||||||| || || |||||||| || || ||||||| ||||| Sbjct 439973 GCGGGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCGGGCATCCACGATCAGGG 440032 Query 44344 CGTGGCGAGAGCTACCCATCTACGGCAAAGTGCGCTACATGAACTACAACGGTTGC 44399 | ||| |||| |||| || ||| | || ||||||||||| |||| ||| Sbjct 440033 C-TGGAAGGAGCGCGAAATCTTTGGTAAAATTCGGTACATGAACTATGACGGATGC 440087 >seq7535 Length=3646130 Score = 105 bits (116), Expect = 6e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||| ||| | ||| |||||| || ||||| || || | | Sbjct 875808 CCACCACGCAGACGAAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTCCGAC 875867 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || ||||||||||| || || || |||| |||||||| || | || Sbjct 875868 AGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 875927 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT---TCC 35686 | | |||||||||| |||||| ||||| | | | | ||| || |||| || Sbjct 875928 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATC---CGATGGCTCA 875984 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| ||||| || || || |||| ||||||||| || |||||||| Sbjct 875985 ACTTCCAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 876034 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || || | || ||| || | || ||||||||||| || || || Sbjct 876071 CTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAA 876130 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | || | | |||||||||| |||||| ||||| | | Sbjct 876131 GATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 876190 Query 35665 TGCCACCGTGTCGCTCGAT---TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||| || |||| || ||||| | ||||| || || || |||| |||||| Sbjct 876191 CTCAATCGTATC---CGATGGCTCAACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTTTT 876247 Query 35722 CACAAATATCTGCAT 35736 ||| || |||||||| Sbjct 876248 CACGAAAATCTGCAT 876262 >seq7521 Length=12184106 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| ||||||||||| |||| | || || | || ||||||||||| || || || | Sbjct 9381156 CCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 9381215 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| |||||||| || | |||| || ||||||||| ||||||| ||||| | | Sbjct 9381216 TCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCT 9381275 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | |||||| | || ||||| | ||||| || || || || | |||||||| | Sbjct 9381276 CGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGA 9381335 Query 35727 ATATCTGCAT 35736 | |||||||| Sbjct 9381336 AAATCTGCAT 9381345 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | || ||||| ||| | || |||||| || |||||||| |||| | Sbjct 8321344 CCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 8321285 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || ||||||||||| || || || |||| |||||||| || | || Sbjct 8321284 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 8321225 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||||| | | | | ||| || | || ||| Sbjct 8321224 ATTCCTTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 8321165 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || |||||||| | ||||| || || |||||||| Sbjct 8321164 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 8321118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450734315006680