Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 329 4e-85
>seq7552
Length=2500597
Score = 329 bits (364), Expect = 4e-85
Identities = 1186/1839 (64%), Gaps = 26/1839 (1%)
Strand=Plus/Plus
Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454
|| || || ||||| ||||||||||| || ||||||| || | |||| || ||||||
Sbjct 1134920 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCATAGAAA 1134979
Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514
|| || || || ||| ||| |||| || || | ||||| || | ||||||
Sbjct 1134980 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 1135039
Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGA-ATTTC 68573
|||||||| || || || | |||||| |||||||| || || ||| || || ||
Sbjct 1135040 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGC-ACGTTTTCACCGAGATCTC 1135098
Query 68574 CCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCGTA---TTTTGAATGGA 68630
||| | || || | | | || || | || | || | ||||| || ||
Sbjct 1135099 CCATACCGTTTTGTACAGATCGCGAATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 1135158
Query 68631 TCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAA 68690
|||| | ||| | |||| ||||| || || || ||||| | | || ||
Sbjct 1135159 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 1135218
Query 68691 AACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750
| | || ||||| | || || | || || || || || | ||| | | | ||||
Sbjct 1135219 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 1135278
Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810
|| || || || || || | |||||||| || || |||||||| || || || ||
Sbjct 1135279 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 1135338
Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTT 68870
|| ||||| || |||| || | ||| | || || || | ||| || || ||
Sbjct 1135339 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTT 1135398
Query 68871 TAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930
| | ||| | ||| ||||| | ||| | ||||| | ||||| || | ||
Sbjct 1135399 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGAT 1135458
Query 68931 TCCGTTACTTGCATATGAT--CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGT 68988
|| || || || || || | || || || || || || || | | || |
Sbjct 1135459 GCCCTTGCT--CACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAAC 1135516
Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048
||||| || || || | || ||||| || || |||||||| || | || ||| || | |
Sbjct 1135517 TCACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTT 1135576
Query 69049 TGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGA 69108
|| || ||| || ||| | ||||| | | || || || ||||| |||| |||||
Sbjct 1135577 TGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGC 1135636
Query 69109 ACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAA 69168
|| || || ||||| || || || | | |||| || | | ||| || || | |||||
Sbjct 1135637 ACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAG 1135696
Query 69169 TAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGT 69228
||||| | ||| || ||||| || ||||| || ||| ||| | || ||||| ||
Sbjct 1135697 TAATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAGC 1135756
Query 69229 TTGAGAAAATCAAA----TCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAG 69284
|| ||| ||| | | ||| || || ||||||| |||| || | || || ||
Sbjct 1135757 TTTGCAAAGTCATACGTTTTGTCTTGCTTTA-CAAACATGTTCAAGGCGATCGAGGCCAG 1135815
Query 69285 ATTACAAACTGCTACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATT 69341
||| || || |||||||||| | || | || | || || || || || | ||
Sbjct 1135816 ATTGCATACCGCTACCTCATCCTTCGAC---GAGTACTCTACAATTTCAGTGCACAAGTT 1135872
Query 69342 ACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTA 69401
||||||||| || || | ||| ||||| ||||| || || || || ||||||||
Sbjct 1135873 GGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTA 1135932
Query 69402 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT 69461
|| || |||| || ||||| | ||| |||||||| || | ||| | || |||
Sbjct 1135933 CAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACA-GATCCT 1135991
Query 69462 A-GCATTTAT-TACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCG 69519
|| || | | | | | | | || |||||| || || || || ||| |||
Sbjct 1135992 GCGCCTTCACCTGCCG-CATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCG 1136050
Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579
|| || || ||||| || | || ||||| || | || ||||||| ||||
Sbjct 1136051 AACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCAC 1136110
Query 69580 ACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGA 69639
| || | ||| || || | ||| || || || || ||||| || || ||| |
Sbjct 1136111 ATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATG 1136170
Query 69640 TCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATA 69699
|| | | | || || || || || ||||| || |||||||||||||| | |||
Sbjct 1136171 TCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATA 1136230
Query 69700 TCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGA 69759
||| |||||| || || ||||| || || | |||| || || || || || ||||||
Sbjct 1136231 TCACCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGA 1136290
Query 69760 TCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTA 69819
|| | ||| | || || || || ||||| | ||||||||| | | ||| || || |
Sbjct 1136291 TCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATC 1136350
Query 69820 CCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTAT 69878
|| || || || || || || |||| | ||||| ||| | | | | || || ||
Sbjct 1136351 CCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATA-CAGTGCACGTTCAGTCCGAT 1136409
Query 69879 TCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTAT 69938
|| || ||| || || ||||| ||||| | |||| ||||| || || ||||| ||
Sbjct 1136410 GCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAAT 1136469
Query 69939 GCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGC 69998
|||||| || |||| | | || || ||| || | || || | ||| ||||
Sbjct 1136470 GCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGCCGC 1136529
Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058
||| | || || || ||||| || || | || || ||||||||||| || ||
Sbjct 1136530 CGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTC 1136589
Query 70059 AATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118
|| |||| || || ||| ||| || || || || || ||||||| ||| |||||
Sbjct 1136590 GATTGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTG 1136649
Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178
|| || || || |||| || || |||| || ||||||| ||||| ||||||||
Sbjct 1136650 GGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAA 1136709
Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217
|| ||||||||||| ||||| | |||||||| ||
Sbjct 1136710 GCCGAAATAGTTGTACCCGAAGTCGCGATCGTAAATGAT 1136748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686818462906440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |