Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq7552 329 4e-85 >seq7552 Length=2500597 Score = 329 bits (364), Expect = 4e-85 Identities = 1186/1839 (64%), Gaps = 26/1839 (1%) Strand=Plus/Plus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || || || ||||| ||||||||||| || ||||||| || | |||| || |||||| Sbjct 1134920 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCATAGAAA 1134979 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || || || || ||| ||| |||| || || | ||||| || | |||||| Sbjct 1134980 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 1135039 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGA-ATTTC 68573 |||||||| || || || | |||||| |||||||| || || ||| || || || Sbjct 1135040 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGC-ACGTTTTCACCGAGATCTC 1135098 Query 68574 CCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCGTA---TTTTGAATGGA 68630 ||| | || || | | | || || | || | || | ||||| || || Sbjct 1135099 CCATACCGTTTTGTACAGATCGCGAATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 1135158 Query 68631 TCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAA 68690 |||| | ||| | |||| ||||| || || || ||||| | | || || Sbjct 1135159 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 1135218 Query 68691 AACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750 | | || ||||| | || || | || || || || || | ||| | | | |||| Sbjct 1135219 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 1135278 Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810 || || || || || || | |||||||| || || |||||||| || || || || Sbjct 1135279 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 1135338 Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTT 68870 || ||||| || |||| || | ||| | || || || | ||| || || || Sbjct 1135339 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTT 1135398 Query 68871 TAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930 | | ||| | ||| ||||| | ||| | ||||| | ||||| || | || Sbjct 1135399 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGAT 1135458 Query 68931 TCCGTTACTTGCATATGAT--CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGT 68988 || || || || || || | || || || || || || || | | || | Sbjct 1135459 GCCCTTGCT--CACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAAC 1135516 Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048 ||||| || || || | || ||||| || || |||||||| || | || ||| || | | Sbjct 1135517 TCACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTT 1135576 Query 69049 TGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGA 69108 || || ||| || ||| | ||||| | | || || || ||||| |||| ||||| Sbjct 1135577 TGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGC 1135636 Query 69109 ACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAA 69168 || || || ||||| || || || | | |||| || | | ||| || || | ||||| Sbjct 1135637 ACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAG 1135696 Query 69169 TAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGT 69228 ||||| | ||| || ||||| || ||||| || ||| ||| | || ||||| || Sbjct 1135697 TAATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAGC 1135756 Query 69229 TTGAGAAAATCAAA----TCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAG 69284 || ||| ||| | | ||| || || ||||||| |||| || | || || || Sbjct 1135757 TTTGCAAAGTCATACGTTTTGTCTTGCTTTA-CAAACATGTTCAAGGCGATCGAGGCCAG 1135815 Query 69285 ATTACAAACTGCTACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATT 69341 ||| || || |||||||||| | || | || | || || || || || | || Sbjct 1135816 ATTGCATACCGCTACCTCATCCTTCGAC---GAGTACTCTACAATTTCAGTGCACAAGTT 1135872 Query 69342 ACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTA 69401 ||||||||| || || | ||| ||||| ||||| || || || || |||||||| Sbjct 1135873 GGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTA 1135932 Query 69402 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT 69461 || || |||| || ||||| | ||| |||||||| || | ||| | || ||| Sbjct 1135933 CAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACA-GATCCT 1135991 Query 69462 A-GCATTTAT-TACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCG 69519 || || | | | | | | | || |||||| || || || || ||| ||| Sbjct 1135992 GCGCCTTCACCTGCCG-CATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCG 1136050 Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579 || || || ||||| || | || ||||| || | || ||||||| |||| Sbjct 1136051 AACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCAC 1136110 Query 69580 ACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGA 69639 | || | ||| || || | ||| || || || || ||||| || || ||| | Sbjct 1136111 ATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATG 1136170 Query 69640 TCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATA 69699 || | | | || || || || || ||||| || |||||||||||||| | ||| Sbjct 1136171 TCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATA 1136230 Query 69700 TCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGA 69759 ||| |||||| || || ||||| || || | |||| || || || || || |||||| Sbjct 1136231 TCACCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGA 1136290 Query 69760 TCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTA 69819 || | ||| | || || || || ||||| | ||||||||| | | ||| || || | Sbjct 1136291 TCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATC 1136350 Query 69820 CCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTAT 69878 || || || || || || || |||| | ||||| ||| | | | | || || || Sbjct 1136351 CCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATA-CAGTGCACGTTCAGTCCGAT 1136409 Query 69879 TCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTAT 69938 || || ||| || || ||||| ||||| | |||| ||||| || || ||||| || Sbjct 1136410 GCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAAT 1136469 Query 69939 GCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGC 69998 |||||| || |||| | | || || ||| || | || || | ||| |||| Sbjct 1136470 GCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGCCGC 1136529 Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058 ||| | || || || ||||| || || | || || ||||||||||| || || Sbjct 1136530 CGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTC 1136589 Query 70059 AATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118 || |||| || || ||| ||| || || || || || ||||||| ||| ||||| Sbjct 1136590 GATTGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTG 1136649 Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178 || || || || |||| || || |||| || ||||||| ||||| |||||||| Sbjct 1136650 GGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAA 1136709 Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 || ||||||||||| ||||| | |||||||| || Sbjct 1136710 GCCGAAATAGTTGTACCCGAAGTCGCGATCGTAAATGAT 1136748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686818462906440