Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_027331.1
Length=170341
Score E
Sequences producing significant alignments: (Bits) Value
seq236 140 4e-28
>seq236
Length=1144
Score = 140 bits (154), Expect = 4e-28
Identities = 272/394 (69%), Gaps = 22/394 (6%)
Strand=Plus/Minus
Query 143187 TTAAGTACGAGGAGATTCTCGACTTCAAGATGCCAAATTGGATAGTACAATGTTGCGGCA 143246
|| || || || || | |||||||| |||||||| || || ||| |||| || || |||
Sbjct 1143 TTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCA 1084
Query 143247 CCACCACGAACTCCGCCTTGGGAACAGGATTTAACTGCAGTTTGGAAGTGTTTCCAGAAA 143306
|||||||| || ||||| || || |||||||| || || || ||||| || || ||||
Sbjct 1083 CCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAAC 1024
Query 143307 GGAATAACTCCAGTAT-----GCTTGACTTCACCGTTTCCGATTTTTG-AACCTTCTGCA 143360
||||| || |||| |||| || ||||| ||| | | ||| |||
Sbjct 1023 GGAATGCAGCCGGTATGGAAAGCTT--CTCCACCG----CGAATCGGGCTACCCAACGCA 970
Query 143361 CGCAACATCCCCGCGTTAATGCCAATACCTGCACGCT----TACTGATATACTCAATAAT 143416
|| | |||||||| ||||| || || ||||| | || || | | ||||
Sbjct 969 CGGATGCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTAT-TTCACAATGGC 911
Query 143417 GCTTGCACTGGCTTTGTTAATTGACTTAAGTGAGTCACCAGCTTCAATAACAACACAAGA 143476
||||| |||| ||||| || | || |||||| ||| || | ||||| ||
Sbjct 910 GCTTGAGGTGGC---ATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGA 854
Query 143477 GCTAAACTGACGAGTCGGTGTACGAGCCCCGGCCATAATTGGAGTAGGCAAAGAAA-TTT 143535
||| |||||||| || || ||||| | || | ||| ||||| ||||||| ||||| |||
Sbjct 853 GCTGAACTGACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTT 794
Query 143536 GACGAGTAGATACGGCGTCATAAAAACGAATTAC 143569
|| | ||||| | ||||||||| ||||| ||||
Sbjct 793 GAAG-GTAGAAATGGCGTCATAGAAACGCTTTAC 761
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 544891530527160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |