Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_027340.1
Length=162160
Score E
Sequences producing significant alignments: (Bits) Value
seq236 125 7e-24
>seq236
Length=1144
Score = 125 bits (138), Expect = 7e-24
Identities = 217/313 (69%), Gaps = 2/313 (1%)
Strand=Plus/Minus
Query 58446 TGCCACATCGGGTAATACATGGTTGCTGAGCCGCCACGGATACCACCCTGAGAACAGCTC 58505
|||||||||||||| ||| || || | || ||||| | || |||||||| |||
Sbjct 1113 TGCCACATCGGGTAGAACAACGTGGCAGCACCACCACGCACGCCGCCCTGAGAGCAGGAT 1054
Query 58506 TTCAGATCACCAACGAACTTCTTGATGAACGGGATCGTACCGGTATGAGTCATCT-CACC 58564
|| | | ||| | |||| |||||| || |||||||| | | || | ||
Sbjct 1053 TTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATGCAGCCGGTATG-GAAAGCTTCTCC 995
Query 58565 GTCGCGGATAGAGGAACCCAGGGCACGGATAGCGCCGAAGTCAACACCGATACCAGCACG 58624
|||| || | | ||||| |||||||| ||| || | ||||| || |||||
Sbjct 994 ACCGCGAATCGGGCTACCCAACGCACGGATGCGGCCCGCGTTGATGCCGATCCCCGCACG 935
Query 58625 CTTAGACACGTATTTCACGATTGCGGTGCCAGTAGCAGTAATGCTGTCCAGGGTGTCACC 58684
| || ||||||||||| || ||| | || ||| |||| |||||| | |||||
Sbjct 934 TTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCATTAATCGAATCCAGGCTATCACC 875
Query 58685 AGACTTGATCAGGACACATGAGCTGAACTGACGGGTACGGGTACGCACGCCTGCCATGAT 58744
| | | |||||| ||||| ||||||||||||||||| | ||||||||||| | ||||||
Sbjct 874 ACATTCGATCAGCACACAGGAGCTGAACTGACGGGTTGGCGTACGCACGCCAGACATGAT 815
Query 58745 AGGTGTTGGGAGA 58757
|| || || |||
Sbjct 814 TGGCGTAGGCAGA 802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518715773419200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |