Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_027340.1 Length=162160 Score E Sequences producing significant alignments: (Bits) Value seq236 125 7e-24 >seq236 Length=1144 Score = 125 bits (138), Expect = 7e-24 Identities = 217/313 (69%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 58446 TGCCACATCGGGTAATACATGGTTGCTGAGCCGCCACGGATACCACCCTGAGAACAGCTC 58505 |||||||||||||| ||| || || | || ||||| | || |||||||| ||| Sbjct 1113 TGCCACATCGGGTAGAACAACGTGGCAGCACCACCACGCACGCCGCCCTGAGAGCAGGAT 1054 Query 58506 TTCAGATCACCAACGAACTTCTTGATGAACGGGATCGTACCGGTATGAGTCATCT-CACC 58564 || | | ||| | |||| |||||| || |||||||| | | || | || Sbjct 1053 TTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATGCAGCCGGTATG-GAAAGCTTCTCC 995 Query 58565 GTCGCGGATAGAGGAACCCAGGGCACGGATAGCGCCGAAGTCAACACCGATACCAGCACG 58624 |||| || | | ||||| |||||||| ||| || | ||||| || ||||| Sbjct 994 ACCGCGAATCGGGCTACCCAACGCACGGATGCGGCCCGCGTTGATGCCGATCCCCGCACG 935 Query 58625 CTTAGACACGTATTTCACGATTGCGGTGCCAGTAGCAGTAATGCTGTCCAGGGTGTCACC 58684 | || ||||||||||| || ||| | || ||| |||| |||||| | ||||| Sbjct 934 TTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCATTAATCGAATCCAGGCTATCACC 875 Query 58685 AGACTTGATCAGGACACATGAGCTGAACTGACGGGTACGGGTACGCACGCCTGCCATGAT 58744 | | | |||||| ||||| ||||||||||||||||| | ||||||||||| | |||||| Sbjct 874 ACATTCGATCAGCACACAGGAGCTGAACTGACGGGTTGGCGTACGCACGCCAGACATGAT 815 Query 58745 AGGTGTTGGGAGA 58757 || || || ||| Sbjct 814 TGGCGTAGGCAGA 802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518715773419200