Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_027344.1 Length=158099 Score E Sequences producing significant alignments: (Bits) Value seq236 120 3e-22 >seq236 Length=1144 Score = 120 bits (132), Expect = 3e-22 Identities = 260/389 (67%), Gaps = 0/389 (0%) Strand=Plus/Minus Query 14910 ACCAAAAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCA 14969 |||| ||| |||| || || ||||||||||| || || | | || || ||||||||| Sbjct 1137 ACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCACCACCA 1078 Query 14970 CGGACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATT 15029 || || ||||| ||||| || |||||||| || ||||| ||||| || |||| ||||| Sbjct 1077 CGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATG 1018 Query 15030 ACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCG 15089 ||| ||||| |||| ||| | ||| || || || || || Sbjct 1017 CAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGATGCGGCCC 958 Query 15090 GCGTTGATGCCTATACCAGCTCGCTTGCTGATATACTTAATAATACTGTTACTTGCTGCA 15149 ||||||||||| || || || || | | | || || | ||| | | | ||| Sbjct 957 GCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCA 898 Query 15150 TTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGACGAGTA 15209 ||||| |||| ||| ||| ||| ||| || | ||||| || || |||||||| || Sbjct 897 TTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTGACGGGTT 838 Query 15210 GGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCTGTCGAGTAGATACAGCG 15269 || ||||| | || | ||| || || ||||||| ||||| | ||||| | ||| Sbjct 837 GGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAGGTAGAAATGGCG 778 Query 15270 TCATAAAAGCGAATAATATGCGCCAGACG 15298 ||||| || || | | || ||||||| Sbjct 777 TCATAGAAACGCTTTACATAATCCAGACG 749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505722282450440