Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_027344.1
Length=158099
Score E
Sequences producing significant alignments: (Bits) Value
seq236 120 3e-22
>seq236
Length=1144
Score = 120 bits (132), Expect = 3e-22
Identities = 260/389 (67%), Gaps = 0/389 (0%)
Strand=Plus/Minus
Query 14910 ACCAAAAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCA 14969
|||| ||| |||| || || ||||||||||| || || | | || || |||||||||
Sbjct 1137 ACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCACCACCA 1078
Query 14970 CGGACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATT 15029
|| || ||||| ||||| || |||||||| || ||||| ||||| || |||| |||||
Sbjct 1077 CGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATG 1018
Query 15030 ACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCG 15089
||| ||||| |||| ||| | ||| || || || || ||
Sbjct 1017 CAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGATGCGGCCC 958
Query 15090 GCGTTGATGCCTATACCAGCTCGCTTGCTGATATACTTAATAATACTGTTACTTGCTGCA 15149
||||||||||| || || || || | | | || || | ||| | | | |||
Sbjct 957 GCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCA 898
Query 15150 TTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGACGAGTA 15209
||||| |||| ||| ||| ||| ||| || | ||||| || || |||||||| ||
Sbjct 897 TTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTGACGGGTT 838
Query 15210 GGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCTGTCGAGTAGATACAGCG 15269
|| ||||| | || | ||| || || ||||||| ||||| | ||||| | |||
Sbjct 837 GGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAGGTAGAAATGGCG 778
Query 15270 TCATAAAAGCGAATAATATGCGCCAGACG 15298
||||| || || | | || |||||||
Sbjct 777 TCATAGAAACGCTTTACATAATCCAGACG 749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505722282450440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |