Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq9607 120 2e-22 >seq9607 Length=27561 Score = 120 bits (132), Expect = 2e-22 Identities = 213/308 (69%), Gaps = 7/308 (2%) Strand=Plus/Minus Query 19223 GGAATGTGAAAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTA 19282 ||| | || |||| ||| ||||| |||||| | || ||| || || ||||| Sbjct 24142 GGATTTTGGAAGA-ATGGGCATTGGTGGATTGGATCGTGAATTTAATGCGATATTTCGAC 24084 Query 19283 GAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATG 19342 | || |||| ||||||||||| | |||| || || ||||| ||||||||||||| | Sbjct 24083 GTGCTTTTGCTTCGCGTGTTTTCCCACCAGAGGTGGTTGAACAACTGGGATGTAAACACG 24024 Query 19343 TTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAAC 19402 | || || | || ||||| || || ||| ||| |||||| | || ||| || || Sbjct 24023 TAAAGGGCATTCTTCTATATGGACCTCCTGGTACTGGTAAAACACTTATGGCGCGACAAA 23964 Query 19403 TTAGTAAA---TTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAA 19459 || | | | ||| | | | |||| || || ||||||||||| | || ||| Sbjct 23963 TTGGAACAATGTTAAATGCTCGAGAACCA---AAGATAGTAAATGGTCCGCAGATTTTAG 23907 Query 19460 ATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAG 19519 |||||||||| ||| |||| |||| ||||| || || | || ||||| || ||||| | Sbjct 23906 ATAAATATGTCGGTGAATCAGAAGCTAATGTGCGTCGACTATTCGCTGATGCCGAAGAGG 23847 Query 19520 AACAAAAA 19527 || ||||| Sbjct 23846 AAGAAAAA 23839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397405036328605