Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 230 2e-55
seq7535 104 2e-17
>seq7552
Length=2500597
Score = 230 bits (254), Expect = 2e-55
Identities = 1187/1863 (64%), Gaps = 53/1863 (3%)
Strand=Plus/Plus
Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465
|| || || || || || || ||||| |||||||||||| |||| ||| ||||||||
Sbjct 1134890 TTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGCCA 1134949
Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGG--TAATTGG 130523
||||| | || || || ||||| ||||| || | ||| || || |
Sbjct 1134950 GTTTTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCA--GCTTGCCATAGTTTG 1135007
Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583
| | ||| ||| ||||||| ||||||||| ||||| ||||| ||||| | ||||| |
Sbjct 1135008 GCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGG 1135067
Query 130584 CCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATG 130642
|||| | || ||| | ||| | |||||||| | || ||||| ||||| | |||
Sbjct 1135068 CCATTTTGATGCACGTTTTCACCGAG-ATCTCCCATACCGTTTTGTACAGATCGCGAATT 1135126
Query 130643 TGTTTGGGTATGCGCGCAATCGATTGAA-CGCTACCGTTGTTGGCTATAATTTCGTTGCG 130701
| | ||||| ||||||| ||| | || | || ||||||| | |||||||||
Sbjct 1135127 TCCTGCGGTATAGCCGCAATCTTTTGGATCGAT-CCATTGTTGGACAGAATTTCGTTCTT 1135185
Query 130702 CATACTTTTATCGTACA-ATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGA 130760
||| ||| ||| | ||| | || ||| ||| | | | ||||| || | |
Sbjct 1135186 CATGTCGAGATCCCACAGACCCATGTTGGTCAA-ATCCTGCAGAAGATGATGGTTCACCA 1135244
Query 130761 TTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGG 130820
|| || || || | ||| ||||| ||| ||||| ||| |||| |||| || || |
Sbjct 1135245 CCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACG 1135304
Query 130821 ATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAG 130880
|||| |||||||||| |||||||| || | || || ||||| |||| | || |
Sbjct 1135305 ATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCG 1135364
Query 130881 AATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGG 130940
|||| |||| |||||| | | ||| ||| |||||| || |||| | ||| ||| |
Sbjct 1135365 AATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCG 1135424
Query 130941 TAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGATT 131000
| |||| | ||||||||||| || | || | ||||| || || | |||||| |
Sbjct 1135425 TCGGTT---CCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGCCCT 1135481
Query 131001 CGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGT 131060
|| ||| ||||| || || | |||| || ||| ||||||| || ||||
Sbjct 1135482 CGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGT 1135541
Query 131061 AATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAA 131120
| || ||||||||| ||||| | ||||| | || || | | ||| ||||| |||
Sbjct 1135542 AGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGAT 1135601
Query 131121 ATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGTT 131180
| ||| | || || || || || | ||||| | || | || | ||| || ||
Sbjct 1135602 AGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGC 1135661
Query 131181 TTAAATTACATTTACGC-GAACATTCGG--TGGGATAAAGGTTAATGTCAATTATTTTGT 131237
| ||| | ||| | | | ||| |||||| || | ||||| |||||||
Sbjct 1135662 GCATATTGGA---GCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGT 1135718
Query 131238 TTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCAG 131297
| | ||||||| ||| | | | ||| |||| || | || ||| ||||
Sbjct 1135719 TCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGT---TT 1135775
Query 131298 TTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTCGT 131357
| || | |||||||| || | || || |||||||| || || || || |
Sbjct 1135776 TGTCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCAT 1135835
Query 131358 CATAATCG--CAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAA 131415
| | ||| | |||| |||||||| | |||||| || | || |||||||| |
Sbjct 1135836 CCT--TCGACGAGTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCCGAT 1135893
Query 131416 ATTTTGTTGATTGCTTTTAGCATTCACATGGTCCTTGTACATCATGTAGGGCGTGCCCGT 131475
||| || || || |||||| ||| | |||||||||| |||||| || ||| ||
Sbjct 1135894 ATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGT 1135953
Query 131476 TTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTGATATTTG 131533
||| || || | ||| || | | | || | || | | || || || |
Sbjct 1135954 TTCCACCTGCGATTCGATGA--TCGCAAACCACAGATCCTGCGCCTTCACCTGCCGCATA 1136011
Query 131534 TATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTG 131593
| | || ||| ||||| ||||| | | || || | || ||| | | ||
Sbjct 1136012 AAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCC---CCAGGTG 1136068
Query 131594 TCC---AAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACT 131650
||| | |||||| ||| || ||||| || ||||| ||||| || ||
Sbjct 1136069 TCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGCCTCCACA 1136128
Query 131651 CGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCT 131710
|||| ||| |||| ||||| | ||| | ||||| |||| || | || |||
Sbjct 1136129 CGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCC 1136188
Query 131711 TCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCC 131770
|| | || | |||| |||| || | ||| || || || || ||||||| || ||
Sbjct 1136189 TCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGGCTCG 1136248
Query 131771 AAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATG 131827
| ||| | || | ||| || ||| || || || |||| || | || || |
Sbjct 1136249 AGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTA 1136308
Query 131828 TTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATG 131887
|||||||| ||||||| ||| ||| ||| |||||| | | || || || | |||
Sbjct 1136309 TTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATG 1136368
Query 131888 TAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAG 131947
|| | || || || | ||| ||| ||||| ||||| || || ||| | | || ||
Sbjct 1136369 TACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAA 1136428
Query 131948 ATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGG-CAATGTC 132006
||||| || || | | || |||| ||||| || || | ||| || ||| || |||
Sbjct 1136429 ATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTC 1136488
Query 132007 GACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCTGAAAACAATGTGGGGCT 132066
|| | ||||| || || | ||| | | ||| | || | ||||| || ||
Sbjct 1136489 AAC-AGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACATAGTTGGCGA 1136547
Query 132067 GGCGTGTGTAAAAAGTTTTTTGGCCATGCACCGA---TACGATTGTATAGCGGACTCGAT 132123
|||||| ||||| | || || ||| || || | | || || | |||||
Sbjct 1136548 GGCGTGGGTAAAGTAACGCTCGGACA-GCA--GATTGTAGGTCTCGATTGCTGCATCGAT 1136604
Query 132124 ATCGCCCAGATGTATGGTCAAT-GCGACCCGCATGTACATGTGTTGAATGCGCTCGGCCG 132182
|| | ||| || | |||| || || ||||| |||||| || ||||||| |
Sbjct 1136605 GTCCTCGCCATGGAT-GCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGA 1136663
Query 132183 TTTTGCCGTCGATTTTGATCAA--ATAACCGTTTTCCAAAGTTTTGAAACCAAAATATTT 132240
|||| || | ||| || | ||| || | || |||||| ||||| || || ||||| ||
Sbjct 1136664 TTTTTCCCTTGATCTTCAGCAAGTATGATCG--TTCCAAGGTTTTAAAGCCGAAATAGTT 1136721
Query 132241 GTA 132243
|||
Sbjct 1136722 GTA 1136724
>seq7535
Length=3646130
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || |||| || | |||| ||| | ||||| || || || || || |||||
Sbjct 875806 TGCCACCACGCAGACGAAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTCCG 875865
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
|| | |||| | || || ||||| || |||||| | || |||||||| ||||| ||||
Sbjct 875866 ACAGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCG 875925
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCA 27197
| | ||||| || || |||||| |||| | || | || || | ||||| ||
Sbjct 875926 GGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCT-CA 875984
Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||||| || || || | || || |||||||||||||| || || ||||||
Sbjct 875985 ACTTCCAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCATA 876035
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| || | |||| ||| | || || || || || || || ||||| |
Sbjct 876036 CCACCACGCAGACGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGAC 876095
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| | || || ||||| || || ||| | || |||||||| ||||| |||||
Sbjct 876096 AGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGG 876155
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199
| ||||| || || |||||| |||| | || | || || | ||||| ||||
Sbjct 876156 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCT-CAAC 876214
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || | || || |||||||||||||| || || ||||||
Sbjct 876215 CTCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCATA 876263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424879912919352
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