Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 100 9e-16
>seq7552
Length=2500597
Score = 100 bits (110), Expect = 9e-16
Identities = 273/410 (67%), Gaps = 6/410 (1%)
Strand=Plus/Minus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| | || || | |||||| ||| || ||||||||||| || ||| ||| ||
Sbjct 1136331 CCGATGCTGCGCGTCTACAACAATACGGCACGGTACGTCGATCAGGGTGGCAACAAGCGG 1136272
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100
|| ||||| ||| ||||||| || ||||||||||| | || || |||| |
Sbjct 1136271 CCTGGAGCATTCGCCATCTATCTCGAGCCGTGGCATGGTGATATATTCGAGTTTCTCGAT 1136212
Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160
||| | || ||||||| |||||| | ||| || ||||| | ||| |||||
Sbjct 1136211 CTGAAGAAAAACACCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTTACGCACTCTGG 1136152
Query 255161 -TGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCCTCATGTGTC 255218
| | | || ||||| |||| || ||||| ||| |||| | ||||| || ||||| |
Sbjct 1136151 ATACCG-GACCTGTTCATGCAGCGTGTGGAGGCGA-ACGAAATGTGGAGTCTGATGTGCC 1136094
Query 255219 CCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGG 255278
| || | ||||| ||| ||| | ||||| || ||||| || || ||||| ||
Sbjct 1136093 CGCACGATTGTCCCGGGCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGCTGTACACGG 1136034
Query 255279 AGTACGAGCGTGCCGGCCGGTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGGAACACGA 255338
||||||| | || || || | || || ||| ||| || | | ||| |||
Sbjct 1136033 GGTACGAGAAAGAGGGTCGCTTTATGCGGCAGGTGAAGGCGCAGGATCTGTGGTTTGCGA 1135974
Query 255339 TGGTGCGCAT-GCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGA 255387
| | || || |||| |||||||||| | |||| | | || |||| ||
Sbjct 1135973 TCAT-CGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGA 1135925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588121891810845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |