Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 138 1e-27
>seq7552
Length=2500597
Score = 138 bits (152), Expect = 1e-27
Identities = 458/704 (65%), Gaps = 15/704 (2%)
Strand=Plus/Plus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| | ||| | ||||| || || || ||||||| || || | |||||||| |||||
Sbjct 1135276 GTAAACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGA 1135335
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
|| || ||||| || |||| || || || |||| || | || ||| |||
Sbjct 1135336 AGCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTC 1135395
Query 110827 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG- 110883
||| | | |||||| | || | | | |||| | |||| |||| || ||||
Sbjct 1135396 CTTCAACTCGGCCCAGTTCCACAGATCCG-TCGGTTCCTTGTTCC-ACATCTCGTACTGC 1135453
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
||| |||||| | | ||| ||||| | || || || | ||| | | ||
Sbjct 1135454 AAGATGCCCTTGCT-CACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGC 1135512
Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
||| ||||||||||| ||||| | ||| || |||||||| || || | ||| |
Sbjct 1135513 CAACTCACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAG 1135572
Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063
|| | || || || || | | ||||| || || || |||| || | ||
Sbjct 1135573 CTTTTGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCC 1135632
Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---AC 111120
|| || || | || || || ||||| |||||||| || ||| || ||| ||
Sbjct 1135633 CTGCACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAG---CGCTTAGCCTCCGGCAC 1135689
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
|||||| |||| ||||||| | ||| ||||| || || |||| | || |||
Sbjct 1135690 GGGATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGTCTTAGCGACTTC 1135749
Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 111240
| || ||| || | ||| | || | |||| || ||| || | | ||||||
Sbjct 1135750 CTTCAGCTTTGCAAAGTCATACGTTT---TGTCTTGCTTTACAAACATGTTCAAGGCGAT 1135806
Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 111300
|| |||| |||||| || || ||||||||| | |||||||| |||||| || ||
Sbjct 1135807 CGAGGCCAGATTGCATACCGCTACCTCATCCTTCGACGAGTACTCTACAATTTCAGTGCA 1135866
Query 111301 TAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATC 111360
|||||||||| || || || || | ||||| |||||||| || ||||| |||||
Sbjct 1135867 CAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATC 1135926
Query 111361 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGA 111404
|||||| |||||||| || || || ||| ||| |||| ||
Sbjct 1135927 CTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGA 1135970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627949405941600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |