Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 109 7e-19
seq7516 104 3e-17
>seq7552
Length=2500597
Score = 109 bits (120), Expect = 7e-19
Identities = 785/1248 (63%), Gaps = 35/1248 (3%)
Strand=Plus/Plus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|| || |||||||| || || || | |||| ||||||| |||| | ||| || || | |
Sbjct 1134932 CGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTC 1134991
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAG---GTTCATACTTTGGGATTGATCGATG 117953
| |||| | |||| ||| || | | ||| | ||| || ||||||||
Sbjct 1134992 AGCTTGCCATAGTTTGGC---TCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATA 1135048
Query 117954 AA-GCGTCCCCGATCCGCCGCCATATCAAT-CACATCCTTCATCTTGATTTCCCACACAG 118011
|| ||| || ||||| || ||||| | || ||| | |||| | ||| ||||| || |
Sbjct 1135049 AACGCG-CCACGATCTGCGGCCATTTTGATGCACGTT-TTCACCGAGATCTCCCATACCG 1135106
Query 118012 TCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCG 118071
| |||| || | ||| || | || ||| || | || |||||||| ||||||
Sbjct 1135107 TTTTGTACAGATCGCGAATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTG- 1135165
Query 118072 CCTTGACCATGAGATC---CTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCT 118128
||| || | || |||||| || ||| ||||| || || | | |||||
Sbjct 1135166 --TTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCT 1135223
Query 118129 CCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATAT 118188
|| ||||| | || || || ||||| |||| || ||| || || | |
Sbjct 1135224 GCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGT 1135283
Query 118189 TGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGG 118248
| | |||||| ||||| || | |||||||| || | ||||| || ||||| || || |
Sbjct 1135284 TCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCG 1135343
Query 118249 GCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAG 118308
|||| || |||| || || || || | || | | || |||||| |
Sbjct 1135344 GCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACT 1135403
Query 118309 CGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 118366
|| |||||| | || | | | | ||| | |||||| || |||| | ||| ||
Sbjct 1135404 CGGCCCAGTTCCACAGATCCG--TCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCC 1135461
Query 118367 TTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGA 118426
| | | | || ||||| | ||||| || || || || | ||||| || |
Sbjct 1135462 CTTGCTCACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACA 1135521
Query 118427 GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGG- 118485
|||||| || || || ||| || || ||||| || || | ||| | || || |
Sbjct 1135522 GCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTA--GCTTTTGA 1135579
Query 118486 -CCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGAC 118543
|||| ||| || ||| || ||| || || || |||| || | || || ||
Sbjct 1135580 GCCTCTTCGCTTTCGTACG-GATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCAC 1135638
Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAA 118603
|||| || || || | || | |||||| || | ||| | ||||||||| |
Sbjct 1135639 GCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTA 1135698
Query 118604 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 118663
||| ||| || | | || ||||| || || ||| | || ||| | |||||
Sbjct 1135699 ATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAGCTT 1135758
Query 118664 TTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 118723
| | | ||| | | | |||| || ||| || | | |||||| || |||||
Sbjct 1135759 TGCAAAGTCATACGTTT---TGTCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCAG 1135815
Query 118724 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGA 118783
||| || || | ||||||||| | |||||||| |||||| ||||||||||| ||
Sbjct 1135816 ATTGCATACCGCTACCTCATCCTTCGACGAGTACTCTACAATTTCAGTGCACAAGTTGGA 1135875
Query 118784 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT--GTGTTACACGCATCCTTGTAA 118841
|| || |||||||| | |||| || || ||||| || || |||||||||||
Sbjct 1135876 ACATTTGATGGTGCCGATATTCTGCTGGTT--ACTTTTACGATTGCAAGCATCCTTGTAC 1135933
Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCA 118901
|||||||| || || || ||| || || | || || || ||| | |||
Sbjct 1135934 AGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGC 1135993
Query 118902 GCTGGCACAGTGGCG-TTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAA 118960
|| ||| || || | || ||||||| ||||||| ||||| || || ||
Sbjct 1135994 GCCTTCAC-CTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAA 1136052
Query 118961 CTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTG 119020
|||||| ||| || || || ||||| || | | ||||| | ||| |||
Sbjct 1136053 CTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCACAT 1136112
Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
| | |||| || |||| |||||| ||||| || |||||||| ||
Sbjct 1136113 TTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGC 1136160
>seq7516
Length=3907879
Score = 104 bits (114), Expect = 3e-17
Identities = 200/290 (69%), Gaps = 4/290 (1%)
Strand=Plus/Minus
Query 179038 GTGAAGATGTACCTCGTTTGAGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTG 179096
|||||||||||||| | | ||| || ||||||||| | || ||||| || || ||
Sbjct 2870249 GTGAAGATGTACCTGGGGCTGG-CGCTGTCCTTGCCACCCGTCAGCCGCGTACCGAACTG 2870191
Query 179097 ACCACATGGCTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGAC 179156
||| | || | || |||||||| ||||| || | ||||| | |||| ||||
Sbjct 2870190 ACCGCCCGGGTACAGCAGATTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 2870131
Query 179157 AATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAAGCCGACTTGTCCGCCACATATGC 179216
||||| ||| || | || ||||||||||| || ||||| |||||||| | |
Sbjct 2870130 GATCGTCGAGCAGAGCGACATCTCGCCGTGATGGTAGGCGGACTTTTCCGCCACCGAACC 2870071
Query 179217 CGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTG-TGGAAGCACGCATACATCA 179275
|||| ||| |||||||||| ||| |||| | ||| | | |||||||| |||| ||
Sbjct 2870070 GGCCAGCTGGGCCACCTTCACCTCGCGCTTGTCG-TCTCGCTTGAAGCACGTGTACAGCA 2870012
Query 179276 CCTTTCTTTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGAACGC 179325
|||| | || ||||| | ||||| |||| || ||||| |||
Sbjct 2870011 CCTTGCGCTGGCCCGGCTTCAACCCGTCCAGCATGCACGGAATGGAGCGC 2869962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618353868040760
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