Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq7535 192 2e-43 seq127 138 3e-27 seq7521 136 1e-26 seq7597 89.7 2e-12 seq7566 89.7 2e-12 seq7587 87.8 5e-12 seq7534 87.8 5e-12 seq7529 87.8 5e-12 seq7524 87.8 5e-12 seq7517 87.8 5e-12 seq7543 84.2 7e-11 >seq7535 Length=3646130 Score = 192 bits (212), Expect = 2e-43 Identities = 181/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | ||||| ||||||||||||||||| || || || ||||| || Sbjct 875804 CATGCCACCACGCAGACGAAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTC 875863 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || ||||| || ||||| ||||| |||||||| || Sbjct 875864 CGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGG 875923 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || ||||| || || ||||| || || || || ||||| ||||||| ||| ||||| || Sbjct 875924 CGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTC 875983 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || || | ||||||||||| || ||||| || ||||||||||| Sbjct 875984 AACTTCCAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 876034 Score = 187 bits (206), Expect = 8e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| |||||||| || ||||| || || || ||||| || Sbjct 876032 CATACCACCACGCAGACGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTC 876091 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || |||||||| ||||| ||||| |||||||| || Sbjct 876092 CGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGG 876151 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || ||||| || || ||||| || || || || ||||| ||||||| ||| ||||| || Sbjct 876152 CGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTC 876211 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || | ||||||||||| || ||||| || ||||||||||| Sbjct 876212 AACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 876262 Score = 143 bits (158), Expect = 8e-29 Identities = 145/189 (77%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| |||||||| || || || || || || ||||| || Sbjct 876260 CATACCACCACGCAGACGGAGAACCAGATGAAGGGTCGATTCCTTCTGGATGTTATAGTC 876319 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || |||||||| ||||| ||||| |||||||| || Sbjct 876320 CGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGG 876379 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || ||||| || || ||||| || || || || || || ||||||| ||| ||||| || Sbjct 876380 CGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCAATCGTATCCGATGGCTC 876439 Query 140687 AACTTCAAG 140695 |||||| || Sbjct 876440 AACTTCGAG 876448 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 2446686 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2446745 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 2446746 CCCGGCATCTCCA 2446758 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 2448835 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2448776 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 2448775 CCCGGCATCTCCA 2448763 >seq127 Length=1066 Score = 138 bits (152), Expect = 3e-27 Identities = 238/343 (69%), Gaps = 2/343 (1%) Strand=Plus/Plus Query 130661 CATACCATAGAACACTTTATAATTTTCACCATTTTCTTCAACAACTTCCCCAGCACATTC 130720 ||| |||||||||| | | |||||||| |||||||| || || || | ||||| Sbjct 705 CATGCCATAGAACAGCATGAATTTTTCACCGTTTTCTTCCACGACGGTTCCTTCGCATTC 764 Query 130721 ATCATGTGCAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTT 130780 ||| || | || | ||| || || ||||| ||||| || || || | ||||| ||||| Sbjct 765 ATCGTGGCCCGCCAGCATACCGCCGAGCATCACAAAGTCTGCACCGCCGCCAAACGCTTT 824 Query 130781 CGCAATATC-CCCGGGAGATTTACAACCCCCATCAGCAATAACATGTCCATTTAATCCAT 130839 |||| ||| ||||| | | ||| || ||||| | || || ||| | || | Sbjct 825 GGCAACATCGCCCGGCACAGA-ACAGCCGCCATCGCTGACAATCTGACCACCGAGGCCGT 883 Query 130840 GTGCCGCATCAGCACACTCTGAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACTT 130899 |||||||||| || ||||| | ||||||||||| || || || || || ||| Sbjct 884 GTGCCGCATCGGCGCACTCGATCACGGCAGAAAGTTGCGGGTAGCCTACACCGGTTTTCA 943 Query 130900 TTCTTGTAGTACAAACAGCACCTGGACCAATACCAATTTTAACAATATCAGCTCCTGCTA 130959 || || ||||| |||| ||||| || || || | ||| || ||||| || || | || Sbjct 944 CTCGGGTGGTACAGACAGAGCCTGGGCCGATCCCTACTTTCACGATATCGGCACCCGATA 1003 Query 130960 AAATTAGTGCTTCGGTCATTTCTCTAGTAGCCACATTACCTGC 131002 ||| ||| |||| |||||| | ||| |||||||||| || Sbjct 1004 GAATCAGTTCTTCTACCATTTCACCAGTCACCACATTACCGGC 1046 >seq7521 Length=12184106 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || ||||| || || || || | || || ||||| || || || || || || ||||| Sbjct 9381158 TTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATC 9381217 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||| |||||||| || ||||| ||||| || ||||| || || || || ||||| || Sbjct 9381218 AGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCG 9381277 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 |||| || || || || || |||||||| | ||||| ||||| |||||||| || ||| Sbjct 9381278 ATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAA 9381337 Query 140730 ATCTGCAT 140737 |||||||| Sbjct 9381338 ATCTGCAT 9381345 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 7348461 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 7348402 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 7348401 CCCGGCATCTCCA 7348389 >seq7597 Length=955730 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948 ||||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | Sbjct 217055 GGGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGAT 216996 Query 235949 ACCCAGCATCTCCA 235962 |||| ||||||||| Sbjct 216995 ACCCGGCATCTCCA 216982 >seq7566 Length=960142 Score = 89.7 bits (98), Expect = 2e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 235886 ATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATC 235945 ||| |||| ||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| Sbjct 833500 ATACGGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACTGGGATC 833559 Query 235946 AAAACCCAGCATCTCCA 235962 | |||||||||||||| Sbjct 833560 GATACCCAGCATCTCCA 833576 >seq7587 Length=1787124 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 141895 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 141954 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 141955 CCCGGCATCTCCA 141967 >seq7534 Length=4057783 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | | Sbjct 1789456 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACTGGGATCGATA 1789515 Query 235950 CCCAGCATCTCCA 235962 ||||||||||||| Sbjct 1789516 CCCAGCATCTCCA 1789528 >seq7529 Length=4681778 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 4390274 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 4390333 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 4390334 CCCGGCATCTCCA 4390346 >seq7524 Length=14321806 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 5308019 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 5308078 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 5308079 CCCGGCATCTCCA 5308091 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 5368521 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 5368580 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 5368581 CCCGGCATCTCCA 5368593 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 5370793 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 5370852 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 5370853 CCCGGCATCTCCA 5370865 >seq7517 Length=11427604 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 3226260 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 3226201 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 3226200 CCCGGCATCTCCA 3226188 Score = 87.8 bits (96), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 3822756 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 3822815 Query 235950 CCCAGCATCTCCATAC 235965 ||| ||||||||| || Sbjct 3822816 CCCGGCATCTCCAGAC 3822831 Score = 87.8 bits (96), Expect = 5e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 235877 TCGTTCAATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGT 235936 ||||||| | |||| ||||| ||| ||||||| ||||||||| ||||| ||||||| Sbjct 3836534 TCGTTCACCGCATGGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGT 3836593 Query 235937 ACCGGGATCAAAACCCAGCATCTCCA 235962 ||||||||| | |||| ||||||||| Sbjct 3836594 ACCGGGATCGATACCCGGCATCTCCA 3836619 >seq7543 Length=2429393 Score = 84.2 bits (92), Expect = 7e-11 Identities = 251/383 (66%), Gaps = 6/383 (2%) Strand=Plus/Minus Query 182919 ACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGT 182978 || || | |||||| || | ||| | |||||| | ||| ||||||| ||| ||||| || Sbjct 25393 ACGTTCAGAATACCGTTGGCGTCCAGATCAAAGGTTACCTCAATCTTTGGCACACCGCGC 25334 Query 182979 GGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTT 183038 || || ||||| || | || || | || | ||| || || || || | Sbjct 25333 GGTGCCGGCGGAATGCCTGATAGGTCGAACTGGCCCAGCAGATTGTTGTCCTTTGTCATG 25274 Query 183039 GCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAA 183098 ||||||||||| ||| | || ||||| | ||| | ||||| || || || || || Sbjct 25273 GCTCTCTCGCCCTCAAACACCTGAATCGACACTCCCGGCTGGTTGTCCGCGTAGGTCGAG 25214 Query 183099 AAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGC-GGAACAATTACAGTCATTAC 183157 || ||| | | || ||||| ||||||||| || || | | ||||| || Sbjct 25213 AAGGTCTGCGTCTGTTTGCACGGAATGCGCGAATTTCGCTCGATCAGCTTC-GTCATCAC 25155 Query 183158 TTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCT-- 183215 | | | ||| ||||| | ||| | || || || || ||||| | || |||| |||| Sbjct 25154 TCCGCCGGCCGTTTCGATTCCGAGCGACAACGGAGCCACATCGACCAACAATACATCTTG 25095 Query 183216 GATGTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCA 183275 ||| ||| || || |||| | ||| || || || || || ||||| ||||| Sbjct 25094 GATCTTT--TCGTCCTTGTCTCCACTAAGAATAGCCGCCTGGACGGCCGCACCGTATGCT 25037 Query 183276 ACAGCTTCATCTGGGTTAATTGA 183298 || || ||||| ||||| || || Sbjct 25036 ACCGCCTCATCCGGGTTGATCGA 25014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515050143233363