Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 298 6e-76
>seq7552
Length=2500597
Score = 298 bits (330), Expect = 6e-76
Identities = 1118/1726 (65%), Gaps = 44/1726 (3%)
Strand=Plus/Minus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177
||||| || || | |||||||||||||| ||| || || |||||| ||| |
Sbjct 1136637 ATGCGCGTTGCTATTGGCATCCATGGCGAGGACATCGATGCAGCAATCGAGACCTACAAT 1136578
Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237
||| || | || | ||| || ||||| |||| || | || || | || |
Sbjct 1136577 CTGCTGTCCGAGCGTTACTTTACCCACGCCTCGCCAACTATGTTTGCGGCGGCCACTCAG 1136518
Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297
|| ||| | ||| ||| ||||| || | ||| || || |||||||||||||||
Sbjct 1136517 CGTCCCCAGCTTTCGTCCTGCTTCCTGTTGACCATGTCCGAAGATAGCATTGAGGGCATC 1136458
Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357
||||| ||||| ||| |||| || | || || |||| | |||| || ||||| | ||
Sbjct 1136457 TACGACACGCTGAAGCAGTGTGCCCTAATTTCAAAGTCGGCCGGTGGCATCGGACTGAAC 1136398
Query 19358 -TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416
||| | |||||| ||| || || ||| || |||||||| | | ||||
Sbjct 1136397 GTGCACTG-TATCCGCGCGAAGGGAACGTACATCTCCGGTACGAACGGGATTTCGAACGG 1136339
Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476
| | || || ||||| ||||||| |||||| ||||| |||||||| | ||||| |||
Sbjct 1136338 TCTGGTGCCGATGCTGCGCGTCTACAACAATACGGCACGGTACGTCGATCAGGGTGGCAA 1136279
Query 19477 CAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTT 19536
||| || || | ||||||||||| |||||||| ||||| | || | | || ||
Sbjct 1136278 CAAGCGGCCTGGAGCATTCGCCATCTATCTCGAGCCGTGGCATGGTGATATATTCGAGTT 1136219
Query 19537 CCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGC 19596
||||| ||| ||| || | |||||| | ||| || ||| | || ||
Sbjct 1136218 TCTCGATCTGAAGAAAAACACCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTTACGC 1136159
Query 19597 CTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGAT 19656
| ||||| |||||||| |||||| || || ||| | ||||| ||| |||||
Sbjct 1136158 ACTCTGGATACCGGACCTGTTCATGCAGCGTGTGGAGGCGAACGAAATGTGGAGTCTGAT 1136099
Query 19657 GTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTA 19716
|||||||||||| || || || ||| | ||| || ||||| | |||| | || ||||
Sbjct 1136098 GTGCCCGCACGATTGTCCCGGGCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGCTGTA 1136039
Query 19717 CCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTG-GG 19775
| | |||| |||| || || | | | ||| ||| | ||| |||| ||
Sbjct 1136038 CACGGGGTACGAGAAAGAGGGTCGCTTTATGCGGCAGGTGAAGGCGCAGGA--TCTGTGG 1135981
Query 19776 ACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC- 19833
||| || || || ||||| || |||||| |||||||||| |||||||| ||
Sbjct 1135980 TTTGCGATCATCGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGATGCT 1135921
Query 19834 CGCGAACG-CCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTA 19892
|| | || |||| || ||| |||| |||||| | ||||| | |||||| |||| |
Sbjct 1135920 TGCAATCGTAAAAGT--AACCAGCAGAATATCGGCACCATCAAATGTTCCAACTTGTGCA 1135863
Query 19893 CTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGT 19952
||||||| | ||| || | ||| ||| || || || |||||||| || |
Sbjct 1135862 CTGAAATTGTAGAGTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCGATCG 1135803
Query 19953 GCCTGCCGACTTTCGTCAAG---GCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGA 20009
| || | || || ||| | | | | |||||||| || || | || ||
Sbjct 1135802 CCTTGAACATGTTTGTAAAGCAAGACAAAACGTATGACTTTGCAAAGCTGAAGGAAGTCG 1135743
Query 20010 CCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCC---GACCG 20066
| | ||| ||||| |||||||| |||| ||| || | || || | | |
Sbjct 1135742 CTAAGACCGTAACGCGCAATCTGAACAAAATCATTGATGTCAATTACTATCCCGTGCCGG 1135683
Query 20067 AGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGG 20126
|||| |||| || |||||||||||| ||||||||| ||||||||| |||||| |||
Sbjct 1135682 AGGCTAAGCGC---TCCAATATGCGCCACAGGCCGATCGGGATCGGCGTGCAGGGCATGG 1135626
Query 20127 CCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCA-AGGCGCGCGAGCTCAAC 20185
|||| | ||||| || | || | | ||| | | | |||| | |||| ||
Sbjct 1135625 CCGATGCGTTCATCCTGATGCGCTATCCGTACGA-AAGCGAAGAGGCTCAAAAGCTAAAT 1135567
Query 20186 AAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCG---TGCGAACTCGCC 20242
|| || ||||| || | ||| ||| || |||||| || || || | |||
Sbjct 1135566 CAGCAAATATTCGAAACCATCTACTACGGCGC---GCTGGAAGCGAGCTGTGAGTTGGCC 1135510
Query 20243 AAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAG 20302
|| || ||||||||||||| | |||| || | | | |||| ||| | |||
Sbjct 1135509 GCTCGAGATGGTCCGTACGAGACGTACGAGGGCAGTCCGGTGAGCAAGGGCATCTTGCAG 1135450
Query 20303 CCGGACATGTGGGGC--GTCACTGA-GAATGAGT---TTTGGAGCGCCCTCAAGGTTGAG 20356
|| |||||| | | || || | || || ||| || | |||| ||
Sbjct 1135449 TACGAGATGTGGAACAAGGAACCGACGGATCTGTGGAACTGGGCCGAGTTGAAGGAAAAG 1135390
Query 20357 ATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACC 20416
||| | ||||| ||||||| ||| |||| | || || |||||||| || || ||
Sbjct 1135389 ATCGCCAAGCACGGCATTCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTCCACG 1135330
Query 20417 GCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGT 20476
|| || || | || ||||| || | ||||||||||||||| | ||| | ||| |
Sbjct 1135329 GCACAAATTCTCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTACAATAGG 1135270
Query 20477 CGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGCGACTTGCAGAAG 20536
|| ||| | || |||||| |||| ||| | || || | | || ||| ||
Sbjct 1135269 CGCGTGCTGTCGGGCGAGTTCCAGGTGGTGAACCATCATCTTCTGCAGGATTTGACCAAC 1135210
Query 20537 ATCGATATGTGGTCGCCCAAAATTAAGAATGAAAT--TGTCCGAGCCGGCGGGAGCG-TC 20593
|| | | ||||| | | | || ||||| ||||| ||||| | ||| || ||
Sbjct 1135209 ATGGGTCTGTGGGATCTCGACATGAAGAACGAAATTCTGTCCAA---CAATGGATCGATC 1135153
Query 20594 C-AGGCATT--GGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATC 20650
| | ||| || ||| || ||| | | || | |||| || |||||||| |||
Sbjct 1135152 CAAAAGATTGCGGCTATACCGCAGGAAATTCGCGATCTGTACAAAACGGTATGGGAGATC 1135093
Query 20651 CCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAG 20710
| ||| | |||| | ||||| || ||||| ||||| | ||||| ||||| ||
Sbjct 1135092 TCGGTGAAAACGTGCATCAAAATGGCCGCAGATCGTGGCGCGTTTATCGATCAGTCGCAA 1135033
Query 20711 TCGCTCAATGTCTTCATGGAGAATCCGAGC-CTGGCGAAGCTGAGCTCCATGCATATGTA 20769
||| |||| | | | | | | || | | |||| ||||||| || || ||| | ||
Sbjct 1135032 TCGTTCAACATTCACGTCGCGGAGCCAAACTATGGC-AAGCTGACGTCGATCCATTTCTA 1134974
Query 20770 CGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815
|||||| | | |||| | || || ||||||||||||||||| |||
Sbjct 1134973 TGGCTGGAAGATGGGGTTGAAAACTGGCATGTACTATCTGCGTACC 1134928
Score = 257 bits (284), Expect = 2e-63
Identities = 1126/1752 (64%), Gaps = 46/1752 (3%)
Strand=Plus/Plus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|| |||| |||||||||||| || || | ||| ||||||| || || | || || |
Sbjct 1134929 GTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCATAGAAATGGATCGAC 1134988
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAG---ATGTTGAGCGACTGGGACTGGTCG 78306
| ||||||| ||| | | || |||| || | ||||||| ||| || ||||| |||
Sbjct 1134989 GTCAGCTTG-CCATAGTTTGG--CTCCGCGACGTGAATGTTGAACGATTGCGACTGATCG 1135045
Query 78307 ATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATG 78366
|| |||| || || || || ||||| | |||| || || || |||||||| |
Sbjct 1135046 ATAAACGCGCCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCCCATACC 1135105
Query 78367 GTCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCC---AGCGCTTGTA-CGCTCCCACC 78422
|| ||| | | | || | | | || || | | ||| | || ||| |
Sbjct 1135106 GTTTTGTACAGATCGCGAATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGATCC-ATT 1135164
Query 78423 GGCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCG 78482
| || |||||| ||||| || | | | ||| || || || | |||| |
Sbjct 1135165 GTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTG 1135224
Query 78483 GACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTT 78542
| || || |||| | || ||||||||| | ||| || | ||| | |||
Sbjct 1135225 CAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTT 1135284
Query 78543 GGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGG 78602
| ||||||||||||||| | || ||||| || | || || || || || || |||||
Sbjct 1135285 CGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGG 1135344
Query 78603 CATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTA---- 78658
||| || || | ||| || ||||| |||| || ||| | ||||| |||| |
Sbjct 1135345 CATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTC 1135404
Query 78659 GGCC--GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTC 78716
|||| || ||| | || ||| | | |||||| || || | ||| ||||
Sbjct 1135405 GGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTT 1135464
Query 78717 GGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGA 78776
| | |||| |||| | |||||||||| | || || ||| | || ||
Sbjct 1135465 GCTCACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCT 1135524
Query 78777 CTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT 78836
| | ||| || ||| ||| | | ||||| || || || |||| | ||||
Sbjct 1135525 CGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTC 1135584
Query 78837 GGTCTCGT-CGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGA 78895
|| | | || ||| | || | || ||||| ||||||||| |||||| |||||||
Sbjct 1135585 T-TCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGA 1135643
Query 78896 TAGCGATCGGTCGGTGGCGCATGTTG---CTCTTTCGGGCCGCCTCGGTCGGGTAAAAGT 78952
| ||||||| | ||||||||| ||| | ||| ||| | ||| |||| |
Sbjct 1135644 TCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAA---T 1135700
Query 78953 TCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGG 79012
| ||| |||| |||||| || ||||| ||| | || || || | || || |
Sbjct 1135701 TGACATCAATGATTTTGTTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTG 1135760
Query 79013 CGAAATCAAAATGATTTCCTTTGATG---AAAGTCGGT--AGGCACAGCGATGCCAGGTT 79067
| || ||| | | ||| ||| | ||| | | |||| | ||| ||||| ||
Sbjct 1135761 CAAAGTCATAC-GTTTTGTCTTGCTTTACAAACATGTTCAAGGCG-ATCGAGGCCAGATT 1135818
Query 79068 GCACACGGCCGTCTCGTCCG--GGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGAC 79125
||| || || ||| ||| | | || | ||| | ||||| |||||||| || ||
Sbjct 1135819 GCATACCGCTACCTCATCCTTCGACGAGTA--CTCTACAATTTCAGTGCACAAGTTGGAA 1135876
Query 79126 GACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCAC 79185
| |||||||||||||| |||| |||||| || || || || || |||||||| |
Sbjct 1135877 CATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGC 1135936
Query 79186 ATGTACGGCGTCCCGGTCTCAACCTGACTCTTGA-GAACGCCGTCC-CAGATGTCCCGGG 79243
|||||||| ||||| || ||||| | || || ||| || ||||| || | |
Sbjct 1135937 ATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGAT--CCTGCG 1135994
Query 79244 CCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAG 79303
|| || | | | | ||||||| | ||||| | ||||| || | |||
Sbjct 1135995 CCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACT 1136054
Query 79304 CCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCT 79363
| || || || || | || || || || ||||||||||||||||| ||| |
Sbjct 1136055 CTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCACATTT 1136114
Query 79364 CGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGC 79423
||| | ||| || || |||||| |||||||| ||||| || || || | ||| |
Sbjct 1136115 CGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCC 1136174
Query 79424 GGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGG 79483
| || | |||||| | ||| ||| ||| |||||||| || | || ||
Sbjct 1136175 GTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCAC 1136234
Query 79484 CGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGA 79543
| ||||||||||| |||||||||||||| | || |||||| ||| ||||| | ||
Sbjct 1136235 CATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGA 1136294
Query 79544 CGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGT 79603
||||||| ||||| |||||| | || || ||||| ||||| | |||| | | ||||
Sbjct 1136295 CGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGT 1136354
Query 79604 TCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCC 79662
|||| ||| ||| || || |||| || || | ||| || | |||||||||
Sbjct 1136355 TCGTACCGGAGATGTACGTTCCCTTCGCGCGGAT-ACAGTGCACGTTCAGTCCGATGCCA 1136413
Query 79663 CCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAG 79722
|||| | |||| || || | || |||| ||| ||||| |||||||||||||| ||
Sbjct 1136414 CCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTA 1136473
Query 79723 TCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTG 79782
|| || ||| | | |||||||||| ||| | ||| || | || | ||
Sbjct 1136474 TCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGCCGCCGCA 1136533
Query 79783 AAGAGGGTCGGCGTCGCGTGCGTGAAG-AACTTTTGGCTCATCAGATCGTACGTCTC-CT 79840
|| | || |||| ||||| || ||| ||| | || || ||||| ||| ||||| |
Sbjct 1136534 AACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGG-ACAGCAGATTGTAGGTCTCGAT 1136592
Query 79841 TGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGG 79900
|| || || ||| ||||| |||||||| | || |||||||| | | || |||||
Sbjct 1136593 TGCTGC-ATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGG 1136651
Query 79901 GCGTCTCGCCGA 79912
| |||| |||
Sbjct 1136652 GGCGCTCGACGA 1136663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548452662132240
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