Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_028686.1
Length=166313
Score E
Sequences producing significant alignments: (Bits) Value
seq236 147 2e-30
>seq236
Length=1144
Score = 147 bits (162), Expect = 2e-30
Identities = 261/378 (69%), Gaps = 2/378 (1%)
Strand=Plus/Minus
Query 128703 TTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGTCGCCGCG 128762
|| || || || ||| |||| ||||||| ||||| || || ||| ||| || || ||
Sbjct 1143 TTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCA 1084
Query 128763 CCACCACGGACTCCGCCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGCTTCCAGAAA 128822
|||||||| || ||||| || ||||||||||| || || || ||||| ||||| ||||
Sbjct 1083 CCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAAC 1024
Query 128823 GGAATAACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCTTCTGCACGAATC 128882
||||| || ||||| |||| || | ||| ||| ||||| ||
Sbjct 1023 GGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGATG 964
Query 128883 ATACCTGCATTAATACCAATACCTGCACGCTTACTGATGTATTTTGTAATTGACGCAGCA 128942
|| || || || || || || ||||| | | |||||| ||| | ||| |
Sbjct 963 CGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGG-CGCTTGA 905
Query 128943 GCTT-CGTTAATTGAATTAAGACTATCACCGCCTTCAATAACCACGCATGAACTAAACTG 129001
| | | ||||| |||| || |||||||| | ||| || | ||| || || || |||||
Sbjct 904 GGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTG 845
Query 129002 ACGTGTCGGAGTACGAACACCAGACATAATTGGAGTTGGCAATGAAATCTTTTTAGTAGA 129061
||| || || ||||| || |||||||| ||||| || |||| ||||| || |||||
Sbjct 844 ACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAGGTAGA 785
Query 129062 AACTGCATCATAGAAACG 129079
|| || |||||||||||
Sbjct 784 AATGGCGTCATAGAAACG 767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 532003625670680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |