Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_028773.1
Length=182145
Score E
Sequences producing significant alignments: (Bits) Value
seq236 147 3e-30
>seq236
Length=1144
Score = 147 bits (162), Expect = 3e-30
Identities = 237/341 (70%), Gaps = 0/341 (0%)
Strand=Plus/Plus
Query 18308 TGCCAACCCCAATTATGGCAGGCGTTCGCACCCCAACCCGCCAGTTCTCAAGCTGTGTTA 18367
|||| || ||||| ||| | ||||| || || |||||||| |||||| ||||||
Sbjct 804 TGCCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGC 863
Query 18368 AGATTGAAGTCGGTGACAGCCTCGAATCAATTAACGAATCAGCCGCCGCAGTCGTAAATT 18427
||| ||| ||||| ||||| || || ||||| | | | ||| | || || |
Sbjct 864 TGATCGAATGTGGTGATAGCCTGGATTCGATTAATGCCACCTCAAGCGCCATTGTGAAAT 923
Query 18428 ATATTAGTAAACGCGCTGGTATCGGTATTAACGCTGGTCGAATTCGTGCGGAAGGAAGTC 18487
| || |||| || || ||||| || ||||| || || || |||||| || || |
Sbjct 924 ACGTTTCCCAACGTGCGGGGATCGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAGCC 983
Query 18488 AAGTTCGCTCTGGTGAAGTCAAACACACTGGTGTTATTCCATTCTGGAAACATTTCCAGA 18547
||||| ||| |||| || || || ||||| |||| || ||||||||||
Sbjct 984 CGATTCGCGGTGGAGAAGCTTTCCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAGA 1043
Query 18548 CTGCTGTTAAATCGTGTTCACAAGGCGGTGTTCGTGGTGGTGCGGCAACTCTGTATTATC 18607
| || || ||||| || || || ||||| || ||||||||||| || || ||| || |
Sbjct 1044 CCGCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTACC 1103
Query 18608 CTATGTGGCATCTTGAATTCGAAAAGCTGATTGTTCTGAAA 18648
| ||||||||||| ||| |||||| ||| | || ||||||
Sbjct 1104 CGATGTGGCATCTGGAAGTCGAAAGCCTGCTGGTGCTGAAA 1144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582659362931800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |