Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq236 147 3e-30 >seq236 Length=1144 Score = 147 bits (162), Expect = 3e-30 Identities = 237/341 (70%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 18308 TGCCAACCCCAATTATGGCAGGCGTTCGCACCCCAACCCGCCAGTTCTCAAGCTGTGTTA 18367 |||| || ||||| ||| | ||||| || || |||||||| |||||| |||||| Sbjct 804 TGCCTACGCCAATCATGTCTGGCGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGC 863 Query 18368 AGATTGAAGTCGGTGACAGCCTCGAATCAATTAACGAATCAGCCGCCGCAGTCGTAAATT 18427 ||| ||| ||||| ||||| || || ||||| | | | ||| | || || | Sbjct 864 TGATCGAATGTGGTGATAGCCTGGATTCGATTAATGCCACCTCAAGCGCCATTGTGAAAT 923 Query 18428 ATATTAGTAAACGCGCTGGTATCGGTATTAACGCTGGTCGAATTCGTGCGGAAGGAAGTC 18487 | || |||| || || ||||| || ||||| || || || |||||| || || | Sbjct 924 ACGTTTCCCAACGTGCGGGGATCGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAGCC 983 Query 18488 AAGTTCGCTCTGGTGAAGTCAAACACACTGGTGTTATTCCATTCTGGAAACATTTCCAGA 18547 ||||| ||| |||| || || || ||||| |||| || |||||||||| Sbjct 984 CGATTCGCGGTGGAGAAGCTTTCCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAGA 1043 Query 18548 CTGCTGTTAAATCGTGTTCACAAGGCGGTGTTCGTGGTGGTGCGGCAACTCTGTATTATC 18607 | || || ||||| || || || ||||| || ||||||||||| || || ||| || | Sbjct 1044 CCGCCGTAAAATCCTGCTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTACC 1103 Query 18608 CTATGTGGCATCTTGAATTCGAAAAGCTGATTGTTCTGAAA 18648 | ||||||||||| ||| |||||| ||| | || |||||| Sbjct 1104 CGATGTGGCATCTGGAAGTCGAAAGCCTGCTGGTGCTGAAA 1144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582659362931800