Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_028881.1
Length=170473
Score E
Sequences producing significant alignments: (Bits) Value
seq236 114 1e-20
>seq236
Length=1144
Score = 114 bits (126), Expect = 1e-20
Identities = 234/348 (67%), Gaps = 0/348 (0%)
Strand=Plus/Minus
Query 142918 TTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 142977
|||||| || ||||| |||| ||||||| |||||| || || || | || |||||
Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085
Query 142978 GCCGCCACGGATTCCACCTTGTGAACATGATTTAACTGCAGTCTGGAAATGCTTCCAGAA 143037
|| ||||| | || || || || || ||||| || || |||||||||||||| ||||
Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025
Query 143038 TGGAATAACACCGGTATGTTTGACTTCACCCATACCAATACGAGAACCTTCAGCACGAAT 143097
||||| |||||||| |||| || | ||| | ||| ||||| ||
Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGAT 965
Query 143098 CATACCAACGTTGATACCAATACCTGCACGTTTAGAAATATACTCGATTATTGAGTTAGC 143157
|| ||||||| || || || ||||||| |||| || | | || | | | |
Sbjct 964 GCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGA 905
Query 143158 AGTTTTATTAATTGATTTCAGCGAGTCACCTGCTTCAATAACAACGCAAGAACTAAACTG 143217
|| |||||| || | ||| ||||| ||| || | || || || || |||||
Sbjct 904 GGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTG 845
Query 143218 ACGGGTCGGGGTACGAGCACCAGCCATAATAGGAGTAGGCAATGAAAT 143265
|||||| || ||||| | |||| ||| || || ||||||| |||||
Sbjct 844 ACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAAT 797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545313874976280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |