Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_029013.1
Length=177688
Score E
Sequences producing significant alignments: (Bits) Value
seq236 194 2e-44
>seq236
Length=1144
Score = 194 bits (214), Expect = 2e-44
Identities = 249/342 (73%), Gaps = 6/342 (2%)
Strand=Plus/Minus
Query 77243 TTTCAGAACCAGCAGGTTTTCAACTTCCAAATGCCAGATCGGATAATACAACGTTGCAGC 77302
|||||| ||||||||| |||| ||||||| |||||| ||||| || ||||||| |||||
Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085
Query 77303 ACCACCACGAACGCCACCTTGTGAACAGGATTTAACCGCTGTCTGAATATGTTTCCAGAA 77362
||||||||| ||||| || || || |||||||| || || ||||| | ||| || ||||
Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025
Query 77363 CGGGATCACGCCTGTATGTACTGCTTCACCACCACGGATTTTAGAACCCATTGCGCGAAT 77422
||| || ||| ||||| | ||||| ||||| || || ||||| || || ||
Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGAT 965
Query 77423 GTGTCCAGCATTAACACCGATACCCGCGCGTTGTGAAATATACTTCACGATCGC---AGA 77479
| | || || || | ||||| ||||| ||||| |||| || ||||| || || ||
Sbjct 964 GCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGA 905
Query 77480 GGTTACAGCATTCAGAGAACCCAGTGAATCACCTGATTCAATCACTACGCAACTGGAAAA 77539
||| ||||| | ||| |||| |||||| |||| |||| || || | ||
Sbjct 904 GGT---GGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAA 848
Query 77540 CTGACGCGTAGGAGTACGCACACCCGCCATAATAGGCGTAGG 77581
|||||| || || |||||||| || | ||| || ||||||||
Sbjct 847 CTGACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGG 806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568398838615680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |