Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_029091.1
Length=168771
Score E
Sequences producing significant alignments: (Bits) Value
seq236 105 7e-18
>seq236
Length=1144
Score = 105 bits (116), Expect = 7e-18
Identities = 255/382 (67%), Gaps = 8/382 (2%)
Strand=Plus/Plus
Query 41873 CGTTTTTATGATGCCGTTTCTACTCATCAAG-TTTCATTGCCAACCCCAATTATGGCAGG 41931
||||| ||||| ||| ||||||| | |||| |||| |||| || ||||| ||| | ||
Sbjct 767 CGTTTCTATGACGCCATTTCTAC-CTTCAAAATTTCTCTGCCTACGCCAATCATGTCTGG 825
Query 41932 TGCTCGTACTCCGACTCGCCAGTTCTCTAGTTGTGTAGTTATTGAAGCCGGTGATTCGTT 41991
| ||||| || || || |||||| ||||| | || ||| |||||| |
Sbjct 826 CGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGCTGATCGAATGTGGTGATAGCCT 885
Query 41992 AAAATCTATTAACAAAACTTCAGCATCAATTATTGAATATATTTCTAAACGAGCTGGTAT 42051
| || ||||| || ||| | ||| | |||| |||| |||| || || ||
Sbjct 886 GGATTCGATTAATGCCACCTCAAGCGCCATTGTGAAATACGTTTCCCAACGTGCGGGGAT 945
Query 42052 CGGTATCAACGTTGGTATGCTTCGTGCAGAAGGTTCTAAGAT---CGGTATGGGTGAAGT 42108
||| ||||||| || | ||||| ||| ||| |||| || ||||
Sbjct 946 CGGCATCAACGCGGGCCGCATCCGTGCGTTGGGTAGCCCGATTCGCGGT---GGAGAAGC 1002
Query 42109 TCGACATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAATCTTGTTC 42168
| ||||| || ||||| |||| || |||||||| || || |||||||| || ||
Sbjct 1003 TTTCCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACCGCCGTAAAATCCTGCTC 1062
Query 42169 TCAAGGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCACTTAGAAGT 42228
||| || || | |||||||||||||| || || || ||||||||||| | |||||
Sbjct 1063 TCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTACCCGATGTGGCATCTGGAAGT 1122
Query 42229 AGAGAACCTATTAGTTCTGAAA 42250
|| | ||| | || ||||||
Sbjct 1123 CGAAAGCCTGCTGGTGCTGAAA 1144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539868191245960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |