Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq7517 82.4 5e-11 >seq7517 Length=11427604 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || || |||| || ||||| || || || || ||||| || || |||| Sbjct 2898605 GACAAGGAGGGCATTCCTCCAGATCAGCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAA 2898664 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| ||| | ||||||||| ||||||||||| || ||| || ||||| ||||| | Sbjct 2898665 GACGGACGTACCTTGTCCGACTACAACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTC 2898724 Query 28003 CGTTTGCGTGGCGGC 28017 ||| |||| || ||| Sbjct 2898725 CGTCTGCGCGGTGGC 2898739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355816769654967