Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq7552 291 1e-73 >seq7552 Length=2500597 Score = 291 bits (322), Expect = 1e-73 Identities = 1189/1866 (64%), Gaps = 16/1866 (1%) Strand=Plus/Plus Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830 |||| |||| |||||||| || | | || || || ||||| ||||||||||| | Sbjct 1134888 TCTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGC 1134947 Query 76831 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAG 76890 ||||||| | |||| |||| || |||||||| || ||||| ||| ||| | | Sbjct 1134948 CAGTTTTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTG 1135007 Query 76891 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 76950 | || || | ||||| || | ||| || |||||||| || || || | ||| || | Sbjct 1135008 GCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGG 1135067 Query 76951 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 77010 ||||||| || || || | || ||||| | |||||| | | | || | Sbjct 1135068 CCATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCGAATTT 1135127 Query 77011 CATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTA 77067 | | || | | | ||||| || || ||| | || | |||| ||||| | Sbjct 1135128 CCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCA 1135187 Query 77068 TATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTT 77127 | || || ||||| | | | || ||| | || |||||| | || || | | Sbjct 1135188 TGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCT 1135247 Query 77128 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 77187 | || || || |||| || | | | |||||| || || || || || | |||| Sbjct 1135248 GGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATT 1135307 Query 77188 CATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTAT 77247 ||||||| || | |||||| || || ||||| || ||||| || |||| || | || Sbjct 1135308 CATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 1135367 Query 77248 TTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAG 77307 | | | || || | ||| || || || | | ||| | ||| ||||| | | Sbjct 1135368 TGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGTCG 1135427 Query 77308 GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGAT--CCATTATA 77365 || | | ||| | ||||| || | || || || || || || || | || Sbjct 1135428 GTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCT--CACCGGACTGCCCTCGTA 1135485 Query 77366 TGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATA 77425 || || || || || ||| | || | ||||| |||||||||| || ||||| || Sbjct 1135486 CGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTAGTA 1135545 Query 77426 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATG 77485 || |||||||| || | || ||| || | ||| || || || || ||||||| | Sbjct 1135546 GATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATAGCG 1135605 Query 77486 TAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545 | || || || ||||| || | ||||| || || || || || || || || | | | Sbjct 1135606 CATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGCGCAT 1135665 Query 77546 ATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605 |||||| ||||| || || | ||||| ||||| | || || ||||| || ||||| Sbjct 1135666 ATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTCAGATT 1135725 Query 77606 TCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTA---T 77662 | || ||| | || ||||| || || ||| ||| | || ||| | Sbjct 1135726 GCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGTTTTGTCTTGCTT 1135785 Query 77663 AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGC 77722 |||||||||||||| || || || || ||||| || || |||||||||| | | | | Sbjct 1135786 TACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATC--CTTCGAC 1135843 Query 77723 A--TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGG 77780 || | || || || || || | || ||||||||| ||||| | ||| || ||| Sbjct 1135844 GAGTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGG 1135903 Query 77781 TTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGT 77840 || || || |||||| | ||||| || || || |||| |||||||| | ||| Sbjct 1135904 TTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGC 1135963 Query 77841 GATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATCATAGATTTGTATCGCCTCTC 77899 |||||||| || | ||| | || || || || | | | | || | ||| Sbjct 1135964 GATTCGATGATCGCAAACCACA-GATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTC 1136022 Query 77900 TCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGG 77959 | | || || || || ||| || || || || ||||| || | || || Sbjct 1136023 TTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGG 1136082 Query 77960 GCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAG 78019 || || | |||||||||| ||| | | ||| || || | ||| || || Sbjct 1136083 ACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAG 1136142 Query 78020 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATT 78079 || |||||||| || || ||| | || || | | || || || || || || Sbjct 1136143 GTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTT 1136202 Query 78080 CTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCAT 78139 || || |||||||||||||| | |||||| |||||| || || ||||| || || | Sbjct 1136203 TTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGGCTCGAGATAGATGGCGAA 1136262 Query 78140 AACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCT 78199 ||||||| || || || || |||||||| | || | || || || || || || | Sbjct 1136263 TGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCG 1136322 Query 78200 CAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGC 78259 || ||| || | | |||||| || | || || || || || || || |||| | || Sbjct 1136323 CAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGC 1136382 Query 78260 GCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACG 78319 ||| ||| | | | || || || || ||| ||| || ||||| || || | Sbjct 1136383 GCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGGCACACTG 1136442 Query 78320 TTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 |||| || |||||||| ||||| || || || || |||| | | || || ||| Sbjct 1136443 CTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAAGCAGGA 1136502 Query 78380 AGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439 || | || || | ||| | || ||| | || || || || || ||||| | Sbjct 1136503 CGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTA 1136562 Query 78440 TTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCC 78499 || || || |||||||| || || || |||| || |||||| ||| || || Sbjct 1136563 ACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGCATCGATGTCCTCGCCATGGATGCC 1136622 Query 78500 TACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAA 78559 | || || ||||||| ||| ||||| || | || || | || || || |||| Sbjct 1136623 AATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAG 1136682 Query 78560 CAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTA 78619 |||||||||| |||||| |||||||| || ||||||||||| ||||| | ||||| Sbjct 1136683 CAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCGAAGTCGCGATCGTA 1136742 Query 78620 AATAAT 78625 ||| || Sbjct 1136743 AATGAT 1136748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694577442369440