Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 291 1e-73
>seq7552
Length=2500597
Score = 291 bits (322), Expect = 1e-73
Identities = 1189/1866 (64%), Gaps = 16/1866 (1%)
Strand=Plus/Plus
Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830
|||| |||| |||||||| || | | || || || ||||| ||||||||||| |
Sbjct 1134888 TCTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGC 1134947
Query 76831 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAG 76890
||||||| | |||| |||| || |||||||| || ||||| ||| ||| | |
Sbjct 1134948 CAGTTTTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTG 1135007
Query 76891 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 76950
| || || | ||||| || | ||| || |||||||| || || || | ||| || |
Sbjct 1135008 GCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGG 1135067
Query 76951 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 77010
||||||| || || || | || ||||| | |||||| | | | || |
Sbjct 1135068 CCATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCGAATTT 1135127
Query 77011 CATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTA 77067
| | || | | | ||||| || || ||| | || | |||| ||||| |
Sbjct 1135128 CCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCA 1135187
Query 77068 TATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTT 77127
| || || ||||| | | | || ||| | || |||||| | || || | |
Sbjct 1135188 TGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCT 1135247
Query 77128 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 77187
| || || || |||| || | | | |||||| || || || || || | ||||
Sbjct 1135248 GGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATT 1135307
Query 77188 CATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTAT 77247
||||||| || | |||||| || || ||||| || ||||| || |||| || | ||
Sbjct 1135308 CATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 1135367
Query 77248 TTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAG 77307
| | | || || | ||| || || || | | ||| | ||| ||||| | |
Sbjct 1135368 TGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGTCG 1135427
Query 77308 GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGAT--CCATTATA 77365
|| | | ||| | ||||| || | || || || || || || || | ||
Sbjct 1135428 GTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCT--CACCGGACTGCCCTCGTA 1135485
Query 77366 TGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATA 77425
|| || || || || ||| | || | ||||| |||||||||| || ||||| ||
Sbjct 1135486 CGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTAGTA 1135545
Query 77426 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATG 77485
|| |||||||| || | || ||| || | ||| || || || || ||||||| |
Sbjct 1135546 GATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATAGCG 1135605
Query 77486 TAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545
| || || || ||||| || | ||||| || || || || || || || || | | |
Sbjct 1135606 CATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGCGCAT 1135665
Query 77546 ATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605
|||||| ||||| || || | ||||| ||||| | || || ||||| || |||||
Sbjct 1135666 ATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTCAGATT 1135725
Query 77606 TCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTA---T 77662
| || ||| | || ||||| || || ||| ||| | || ||| |
Sbjct 1135726 GCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGTTTTGTCTTGCTT 1135785
Query 77663 AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGC 77722
|||||||||||||| || || || || ||||| || || |||||||||| | | | |
Sbjct 1135786 TACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATC--CTTCGAC 1135843
Query 77723 A--TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGG 77780
|| | || || || || || | || ||||||||| ||||| | ||| || |||
Sbjct 1135844 GAGTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGG 1135903
Query 77781 TTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGT 77840
|| || || |||||| | ||||| || || || |||| |||||||| | |||
Sbjct 1135904 TTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGC 1135963
Query 77841 GATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATCATAGATTTGTATCGCCTCTC 77899
|||||||| || | ||| | || || || || | | | | || | |||
Sbjct 1135964 GATTCGATGATCGCAAACCACA-GATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTC 1136022
Query 77900 TCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGG 77959
| | || || || || ||| || || || || ||||| || | || ||
Sbjct 1136023 TTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGG 1136082
Query 77960 GCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAG 78019
|| || | |||||||||| ||| | | ||| || || | ||| || ||
Sbjct 1136083 ACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAG 1136142
Query 78020 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATT 78079
|| |||||||| || || ||| | || || | | || || || || || ||
Sbjct 1136143 GTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTT 1136202
Query 78080 CTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCAT 78139
|| || |||||||||||||| | |||||| |||||| || || ||||| || || |
Sbjct 1136203 TTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGGCTCGAGATAGATGGCGAA 1136262
Query 78140 AACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCT 78199
||||||| || || || || |||||||| | || | || || || || || || |
Sbjct 1136263 TGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCG 1136322
Query 78200 CAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGC 78259
|| ||| || | | |||||| || | || || || || || || || |||| | ||
Sbjct 1136323 CAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGC 1136382
Query 78260 GCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACG 78319
||| ||| | | | || || || || ||| ||| || ||||| || || |
Sbjct 1136383 GCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGGCACACTG 1136442
Query 78320 TTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379
|||| || |||||||| ||||| || || || || |||| | | || || |||
Sbjct 1136443 CTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAAGCAGGA 1136502
Query 78380 AGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439
|| | || || | ||| | || ||| | || || || || || ||||| |
Sbjct 1136503 CGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTA 1136562
Query 78440 TTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCC 78499
|| || || |||||||| || || || |||| || |||||| ||| || ||
Sbjct 1136563 ACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGCATCGATGTCCTCGCCATGGATGCC 1136622
Query 78500 TACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAA 78559
| || || ||||||| ||| ||||| || | || || | || || || ||||
Sbjct 1136623 AATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAG 1136682
Query 78560 CAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTA 78619
|||||||||| |||||| |||||||| || ||||||||||| ||||| | |||||
Sbjct 1136683 CAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCGAAGTCGCGATCGTA 1136742
Query 78620 AATAAT 78625
||| ||
Sbjct 1136743 AATGAT 1136748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694577442369440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |