Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 226 4e-54
>seq7552
Length=2500597
Score = 226 bits (250), Expect = 4e-54
Identities = 1184/1879 (63%), Gaps = 18/1879 (1%)
Strand=Plus/Plus
Query 75366 TCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATAC 75425
|||| |||| ||| ||||| || | | || || || ||||| ||||||||||| |
Sbjct 1134888 TCTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGC 1134947
Query 75426 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCG 75485
||||||| | |||| |||| || |||||||| || || || ||| ||| | |
Sbjct 1134948 CAGTTTTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTG 1135007
Query 75486 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 75545
| || || | ||||| || | ||| || |||||||| || || || | ||| || |
Sbjct 1135008 GCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGG 1135067
Query 75546 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 75605
||||||| || || || | || ||||| | |||||| | | | || |
Sbjct 1135068 CCATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCGAATTT 1135127
Query 75606 CATCTGGAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGA 75662
| | || | | | | ||||| || ||||| | || | |||| ||||| |
Sbjct 1135128 CCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCA 1135187
Query 75663 TCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTT 75722
| || || ||||| | | ||| ||| | || |||||| | || || | |
Sbjct 1135188 TGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCT 1135247
Query 75723 GAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 75782
| || || || |||| || | | | |||||| || || || || || | ||||
Sbjct 1135248 GGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATT 1135307
Query 75783 CATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTAT 75842
||||||| || | |||||| || || ||||| |||||||| || |||| || | ||
Sbjct 1135308 CATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 1135367
Query 75843 TTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATG 75902
| | | || || | ||| || || || | | ||| | ||| ||||| | |
Sbjct 1135368 TGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGTCG 1135427
Query 75903 GTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGAT--CCATTATA 75960
|| | | ||| | ||||| || | || || ||||| || || || | ||
Sbjct 1135428 GTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCT--CACCGGACTGCCCTCGTA 1135485
Query 75961 TGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATA 76020
|| ||||| | || || | || | || || ||||| || | ||| ||||| ||
Sbjct 1135486 CGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTAGTA 1135545
Query 76021 AATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATG 76080
|| |||||||| || | || ||| || | ||| || || || || | ||||| |
Sbjct 1135546 GATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATAGCG 1135605
Query 76081 TAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140
| || || || ||||| || | ||||| || || || || || || || || | | |
Sbjct 1135606 CATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGCGCAT 1135665
Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200
|||||| | ||| || || | || || ||||| | ||| || ||||| || |||||
Sbjct 1135666 ATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTCAGATT 1135725
Query 76201 TCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATC-- 76258
| || ||| | || ||||| || || ||| ||| | || ||| |
Sbjct 1135726 GCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGTTTTGTCTTGCTT 1135785
Query 76259 -ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGC 76317
|||||||| || | || || || || ||||| || || |||||||||| | | | |
Sbjct 1135786 TACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATC--CTTCGAC 1135843
Query 76318 A--TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGG 76375
|| | || || || ||||| | || ||| ||||| || || | ||| || |||
Sbjct 1135844 GAGTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGG 1135903
Query 76376 TTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGT 76435
|| || || || || | ||||| || || | |||| || ||||| | |||
Sbjct 1135904 TTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGC 1135963
Query 76436 GATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTATCGCTTCTC 76494
|||||||| || | ||| | || || || || | | | || |||
Sbjct 1135964 GATTCGATGATCGCAAACCACA-GATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTC 1136022
Query 76495 TCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGG 76554
| | || || || || | | || || || || ||||| || | || ||
Sbjct 1136023 TTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGG 1136082
Query 76555 ACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAG 76614
||| || | ||| ||||||| |||| | | ||| || || | ||| || ||
Sbjct 1136083 ACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAG 1136142
Query 76615 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATT 76674
|| |||||||| || || ||| | || || | | || || || || || ||
Sbjct 1136143 GTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTT 1136202
Query 76675 CTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 76734
|| || ||||| || ||||| | |||||| |||||| || || ||||| || || |
Sbjct 1136203 TTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGGCTCGAGATAGATGGCGAA 1136262
Query 76735 AACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCT 76794
| || || || || || || |||||||| | || | || || || || || || |
Sbjct 1136263 TGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCG 1136322
Query 76795 CAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGC 76854
|| ||| || | | ||||| || | || || || || || || || |||| ||
Sbjct 1136323 CAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGC 1136382
Query 76855 ACGAATATTACTAATAGAT-AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGC 76913
|| ||| | | | | || || || || || ||| || || ||||| |||||
Sbjct 1136383 GCGGATAC-AGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGGCACACT 1136441
Query 76914 GTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGC 76973
| |||| ||||| ||||||||||| || ||||| || |||| | | || || |||
Sbjct 1136442 GCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAAGCAGG 1136501
Query 76974 TAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACC 77033
|| | || || | ||| | || ||||| || || || || || || ||
Sbjct 1136502 ACGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGT 1136561
Query 77034 ATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTC 77093
| || || || |||||||| || || || |||| || || ||| ||| || |
Sbjct 1136562 AACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGCATCGATGTCCTCGCCATGGATGC 1136621
Query 77094 CTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCA 77153
| | ||| || ||||||| ||| ||||| || || || || | || || || ||||
Sbjct 1136622 CAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCA 1136681
Query 77154 ACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGT 77213
|||||||||| |||||| |||||||| || ||||||||||| ||||| | ||||
Sbjct 1136682 GCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCGAAGTCGCGATCGT 1136741
Query 77214 AAATAATAACCGAATTTAG 77232
|||| || |||| || ||
Sbjct 1136742 AAATGATGGCCGAGTTCAG 1136760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712840640214720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |