Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq7552 226 4e-54 >seq7552 Length=2500597 Score = 226 bits (250), Expect = 4e-54 Identities = 1184/1879 (63%), Gaps = 18/1879 (1%) Strand=Plus/Plus Query 75366 TCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATAC 75425 |||| |||| ||| ||||| || | | || || || ||||| ||||||||||| | Sbjct 1134888 TCTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGC 1134947 Query 75426 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCG 75485 ||||||| | |||| |||| || |||||||| || || || ||| ||| | | Sbjct 1134948 CAGTTTTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTG 1135007 Query 75486 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 75545 | || || | ||||| || | ||| || |||||||| || || || | ||| || | Sbjct 1135008 GCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGG 1135067 Query 75546 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 75605 ||||||| || || || | || ||||| | |||||| | | | || | Sbjct 1135068 CCATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCGAATTT 1135127 Query 75606 CATCTGGAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGA 75662 | | || | | | | ||||| || ||||| | || | |||| ||||| | Sbjct 1135128 CCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCA 1135187 Query 75663 TCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTT 75722 | || || ||||| | | ||| ||| | || |||||| | || || | | Sbjct 1135188 TGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCT 1135247 Query 75723 GAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 75782 | || || || |||| || | | | |||||| || || || || || | |||| Sbjct 1135248 GGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATT 1135307 Query 75783 CATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTAT 75842 ||||||| || | |||||| || || ||||| |||||||| || |||| || | || Sbjct 1135308 CATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 1135367 Query 75843 TTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATG 75902 | | | || || | ||| || || || | | ||| | ||| ||||| | | Sbjct 1135368 TGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGTCG 1135427 Query 75903 GTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGAT--CCATTATA 75960 || | | ||| | ||||| || | || || ||||| || || || | || Sbjct 1135428 GTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCT--CACCGGACTGCCCTCGTA 1135485 Query 75961 TGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATA 76020 || ||||| | || || | || | || || ||||| || | ||| ||||| || Sbjct 1135486 CGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTAGTA 1135545 Query 76021 AATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATG 76080 || |||||||| || | || ||| || | ||| || || || || | ||||| | Sbjct 1135546 GATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATAGCG 1135605 Query 76081 TAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140 | || || || ||||| || | ||||| || || || || || || || || | | | Sbjct 1135606 CATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGCGCAT 1135665 Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 |||||| | ||| || || | || || ||||| | ||| || ||||| || ||||| Sbjct 1135666 ATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTCAGATT 1135725 Query 76201 TCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATC-- 76258 | || ||| | || ||||| || || ||| ||| | || ||| | Sbjct 1135726 GCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGTTTTGTCTTGCTT 1135785 Query 76259 -ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGC 76317 |||||||| || | || || || || ||||| || || |||||||||| | | | | Sbjct 1135786 TACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATC--CTTCGAC 1135843 Query 76318 A--TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGG 76375 || | || || || ||||| | || ||| ||||| || || | ||| || ||| Sbjct 1135844 GAGTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGG 1135903 Query 76376 TTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGT 76435 || || || || || | ||||| || || | |||| || ||||| | ||| Sbjct 1135904 TTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGC 1135963 Query 76436 GATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTATCGCTTCTC 76494 |||||||| || | ||| | || || || || | | | || ||| Sbjct 1135964 GATTCGATGATCGCAAACCACA-GATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTC 1136022 Query 76495 TCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGG 76554 | | || || || || | | || || || || ||||| || | || || Sbjct 1136023 TTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGG 1136082 Query 76555 ACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAG 76614 ||| || | ||| ||||||| |||| | | ||| || || | ||| || || Sbjct 1136083 ACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAG 1136142 Query 76615 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATT 76674 || |||||||| || || ||| | || || | | || || || || || || Sbjct 1136143 GTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTT 1136202 Query 76675 CTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 76734 || || ||||| || ||||| | |||||| |||||| || || ||||| || || | Sbjct 1136203 TTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGGCTCGAGATAGATGGCGAA 1136262 Query 76735 AACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCT 76794 | || || || || || || |||||||| | || | || || || || || || | Sbjct 1136263 TGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCG 1136322 Query 76795 CAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGC 76854 || ||| || | | ||||| || | || || || || || || || |||| || Sbjct 1136323 CAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGC 1136382 Query 76855 ACGAATATTACTAATAGAT-AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGC 76913 || ||| | | | | || || || || || ||| || || ||||| ||||| Sbjct 1136383 GCGGATAC-AGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGGCACACT 1136441 Query 76914 GTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGC 76973 | |||| ||||| ||||||||||| || ||||| || |||| | | || || ||| Sbjct 1136442 GCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAAGCAGG 1136501 Query 76974 TAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACC 77033 || | || || | ||| | || ||||| || || || || || || || Sbjct 1136502 ACGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGT 1136561 Query 77034 ATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTC 77093 | || || || |||||||| || || || |||| || || ||| ||| || | Sbjct 1136562 AACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGCATCGATGTCCTCGCCATGGATGC 1136621 Query 77094 CTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCA 77153 | | ||| || ||||||| ||| ||||| || || || || | || || || |||| Sbjct 1136622 CAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCA 1136681 Query 77154 ACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGT 77213 |||||||||| |||||| |||||||| || ||||||||||| ||||| | |||| Sbjct 1136682 GCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCGAAGTCGCGATCGT 1136741 Query 77214 AAATAATAACCGAATTTAG 77232 |||| || |||| || || Sbjct 1136742 AAATGATGGCCGAGTTCAG 1136760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712840640214720