Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_031057.1 Length=180219 Score E Sequences producing significant alignments: (Bits) Value seq236 205 1e-47 >seq236 Length=1144 Score = 205 bits (226), Expect = 1e-47 Identities = 380/548 (69%), Gaps = 16/548 (3%) Strand=Plus/Plus Query 43197 TGAATT-CTCTTACGCTGGCGTACAGCAGTTGATCGGGAAATATCTGTTGCAGGATCGCA 43255 |||||| ||| ||||| | || |||||||| |||||||| ||| ||||| | ||| Sbjct 606 TGAATTTCTCCTACGCGGCAGTCAAGCAGTTGGAAGGGAAATACCTGGTGCAGAACCGCG 665 Query 43256 CCAACGGTGACATCTACGAAACACCGCAATATGCGTTTATGCTGATTGCTATGTGTCTGC 43315 || |||||| |||||||| | | || | || ||| ||| | || || ||| Sbjct 666 TCAGCGGTGAGATCTACGAGAGCGCCCAGTTCCTGTATATTCTGGTCGCCGCCTGCCTGT 725 Query 43316 A-TCAGGACGAACCGCGAACCCTGAGCGCATTTA-ATCATGTTGTCGATTTCTACAACGC 43373 || || | | ||||| || ||| | | || |||| |||||| |||| Sbjct 726 TCTCTGG-CTATCCGCGCGCCA----CGCGTCTGGATTATGTAAAGCGTTTCTATGACGC 780 Query 43374 AATTTCGGATCGT-AAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTA 43432 ||||| | | | || | || | |||||||| || ||| |||| |||||||| || | Sbjct 781 CATTTCT-ACCTTCAAAATTTCTCTGCCTACGCCAATCATGTCTGGCGTGCGTACGCCAA 839 Query 43433 CGCGTCAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATG 43492 | |||||||| | || || |||| |||| |||||| |||| ||| | |||| Sbjct 840 CCCGTCAGTTCAGCTCCTGTGTGCTGATCGAATGTGGTGATAGCCTGGATTCGATTAATG 899 Query 43493 CTGTAACCTCT---GCGATCGTGAAGTATATTTCACAACGCGCGGGTATCGGTGTTAATG 43549 | ||||| || || ||||| || |||| ||||| ||||| ||||| | || | Sbjct 900 CC---ACCTCAAGCGCCATTGTGAAATACGTTTCCCAACGTGCGGGGATCGGCATCAACG 956 Query 43550 CTGGACACATTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCG 43609 | || | ||| || || ||||| || || ||||| ||||| | ||||| ||| Sbjct 957 CGGGCCGCATCCGTGCGTTGGGTAGCCCGATTCGCGGTGGAGAAGCTTTCCATACCGGCT 1016 Query 43610 TGATCCCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTC 43669 || ||||||| || ||| | ||||| || || |||||||| || || || ||||| | Sbjct 1017 GCATTCCGTTCTACAAGCATTTCCAGACCGCCGTAAAATCCTGCTCTCAGGGCGGCGTGC 1076 Query 43670 GTGGTGGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGG 43729 ||||||||||||| ||||||| || ||||| |||||| ||||||| |||| |||||||| Sbjct 1077 GTGGTGGTGCTGCCACGTTGTTCTACCCGATGTGGCATCTGGAAGTCGAAAGCCTGCTGG 1136 Query 43730 TTCTGAAA 43737 | |||||| Sbjct 1137 TGCTGAAA 1144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576496973469640