Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_031057.1
Length=180219
Score E
Sequences producing significant alignments: (Bits) Value
seq236 205 1e-47
>seq236
Length=1144
Score = 205 bits (226), Expect = 1e-47
Identities = 380/548 (69%), Gaps = 16/548 (3%)
Strand=Plus/Plus
Query 43197 TGAATT-CTCTTACGCTGGCGTACAGCAGTTGATCGGGAAATATCTGTTGCAGGATCGCA 43255
|||||| ||| ||||| | || |||||||| |||||||| ||| ||||| | |||
Sbjct 606 TGAATTTCTCCTACGCGGCAGTCAAGCAGTTGGAAGGGAAATACCTGGTGCAGAACCGCG 665
Query 43256 CCAACGGTGACATCTACGAAACACCGCAATATGCGTTTATGCTGATTGCTATGTGTCTGC 43315
|| |||||| |||||||| | | || | || ||| ||| | || || |||
Sbjct 666 TCAGCGGTGAGATCTACGAGAGCGCCCAGTTCCTGTATATTCTGGTCGCCGCCTGCCTGT 725
Query 43316 A-TCAGGACGAACCGCGAACCCTGAGCGCATTTA-ATCATGTTGTCGATTTCTACAACGC 43373
|| || | | ||||| || ||| | | || |||| |||||| ||||
Sbjct 726 TCTCTGG-CTATCCGCGCGCCA----CGCGTCTGGATTATGTAAAGCGTTTCTATGACGC 780
Query 43374 AATTTCGGATCGT-AAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTA 43432
||||| | | | || | || | |||||||| || ||| |||| |||||||| || |
Sbjct 781 CATTTCT-ACCTTCAAAATTTCTCTGCCTACGCCAATCATGTCTGGCGTGCGTACGCCAA 839
Query 43433 CGCGTCAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATG 43492
| |||||||| | || || |||| |||| |||||| |||| ||| | ||||
Sbjct 840 CCCGTCAGTTCAGCTCCTGTGTGCTGATCGAATGTGGTGATAGCCTGGATTCGATTAATG 899
Query 43493 CTGTAACCTCT---GCGATCGTGAAGTATATTTCACAACGCGCGGGTATCGGTGTTAATG 43549
| ||||| || || ||||| || |||| ||||| ||||| ||||| | || |
Sbjct 900 CC---ACCTCAAGCGCCATTGTGAAATACGTTTCCCAACGTGCGGGGATCGGCATCAACG 956
Query 43550 CTGGACACATTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCG 43609
| || | ||| || || ||||| || || ||||| ||||| | ||||| |||
Sbjct 957 CGGGCCGCATCCGTGCGTTGGGTAGCCCGATTCGCGGTGGAGAAGCTTTCCATACCGGCT 1016
Query 43610 TGATCCCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTC 43669
|| ||||||| || ||| | ||||| || || |||||||| || || || ||||| |
Sbjct 1017 GCATTCCGTTCTACAAGCATTTCCAGACCGCCGTAAAATCCTGCTCTCAGGGCGGCGTGC 1076
Query 43670 GTGGTGGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGG 43729
||||||||||||| ||||||| || ||||| |||||| ||||||| |||| ||||||||
Sbjct 1077 GTGGTGGTGCTGCCACGTTGTTCTACCCGATGTGGCATCTGGAAGTCGAAAGCCTGCTGG 1136
Query 43730 TTCTGAAA 43737
| ||||||
Sbjct 1137 TGCTGAAA 1144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 576496973469640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |