Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_031065.1 Length=159878 Score E Sequences producing significant alignments: (Bits) Value seq236 120 3e-22 >seq236 Length=1144 Score = 120 bits (132), Expect = 3e-22 Identities = 260/389 (67%), Gaps = 0/389 (0%) Strand=Plus/Minus Query 132649 ACAAGCAGGTTTTCAACTTCTAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCA 132708 || |||||| |||| ||||| ||||||||||| || || | | || || ||||||||| Sbjct 1137 ACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCACCACCA 1078 Query 132709 CGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAAAAAGGAATT 132768 || || ||||| ||||| || |||||||| || ||||| ||||| || | || ||||| Sbjct 1077 CGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAACGGAATG 1018 Query 132769 ACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCG 132828 ||| ||||| |||| ||| | ||| || || || || || Sbjct 1017 CAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGATGCGGCCC 958 Query 132829 GCGTTGATGCCTATACCAGCTCGCTTGCTGATATACTTAATAATACTGTTACTTGCCGCA 132888 ||||||||||| || || || || | | | || || | ||| | | | ||| Sbjct 957 GCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGAGGTGGCA 898 Query 132889 TTAATAGAATTCAGTGAATCGCCAGCTTCGATAACTACACAAGAACTAAATTGACGAGTA 132948 ||||| |||| ||| ||| ||| |||||| | ||||| || || || ||||| || Sbjct 897 TTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTGACGGGTT 838 Query 132949 GGAGTACGAGCCCCCGCCATAATTGGTGTAGGTAATGAAATCTGTCGAGTAGATACAGCA 133008 || ||||| | || | ||| ||||| ||||| | ||||| | ||||| | || Sbjct 837 GGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAGGTAGAAATGGCG 778 Query 133009 TCATAAAAGCGAATAATATGCGCCAGACG 133037 ||||| || || | | || ||||||| Sbjct 777 TCATAGAAACGCTTTACATAATCCAGACG 749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414333776080