Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_031087.1 Length=168272 Score E Sequences producing significant alignments: (Bits) Value seq236 147 2e-30 >seq236 Length=1144 Score = 147 bits (162), Expect = 2e-30 Identities = 261/378 (69%), Gaps = 2/378 (1%) Strand=Plus/Minus Query 141315 TTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGTCGCCGCG 141374 || || || || ||| |||| ||||||| ||||| || || ||| ||| || || || Sbjct 1143 TTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCA 1084 Query 141375 CCACCACGGACTCCACCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGTTTCCAGAAA 141434 |||||||| || || || || ||||||||||| || || || ||||| || || |||| Sbjct 1083 CCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAAC 1024 Query 141435 GGAATAACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCCTCGGCGCGAATC 141494 ||||| || ||||| |||| || | ||| |||| || || || Sbjct 1023 GGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGATG 964 Query 141495 ATGCCTGCATTAATACCAATACCTGCACGCTTACTGATGTATTTCGTAATTGATGCAGCA 141554 ||| || || || || || || ||||| | | ||||||| ||| | || | Sbjct 963 CGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGC-GCTTGA 905 Query 141555 GCTT-CGTTAATTGAATTAAGACTATCACCACCTTCAATAACCACGCATGAACTGAACTG 141613 | | | ||||| |||| || |||||||||| ||| || | ||| || || |||||||| Sbjct 904 GGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTG 845 Query 141614 GCGTGTCGGAGTACGAACACCAGACATAATTGGTGTTGGCAATGAAATCTTTTTAGTAGA 141673 || || || ||||| || |||||||| ||||| || |||| ||||| || ||||| Sbjct 844 ACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAGGTAGA 785 Query 141674 AACTGCATCATAGAAACG 141691 || || ||||||||||| Sbjct 784 AATGGCGTCATAGAAACG 767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538271601245120