Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_031087.1
Length=168272
Score E
Sequences producing significant alignments: (Bits) Value
seq236 147 2e-30
>seq236
Length=1144
Score = 147 bits (162), Expect = 2e-30
Identities = 261/378 (69%), Gaps = 2/378 (1%)
Strand=Plus/Minus
Query 141315 TTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGTCGCCGCG 141374
|| || || || ||| |||| ||||||| ||||| || || ||| ||| || || ||
Sbjct 1143 TTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGCA 1084
Query 141375 CCACCACGGACTCCACCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGTTTCCAGAAA 141434
|||||||| || || || || ||||||||||| || || || ||||| || || ||||
Sbjct 1083 CCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAAC 1024
Query 141435 GGAATAACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCCTCGGCGCGAATC 141494
||||| || ||||| |||| || | ||| |||| || || ||
Sbjct 1023 GGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGATG 964
Query 141495 ATGCCTGCATTAATACCAATACCTGCACGCTTACTGATGTATTTCGTAATTGATGCAGCA 141554
||| || || || || || || ||||| | | ||||||| ||| | || |
Sbjct 963 CGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGC-GCTTGA 905
Query 141555 GCTT-CGTTAATTGAATTAAGACTATCACCACCTTCAATAACCACGCATGAACTGAACTG 141613
| | | ||||| |||| || |||||||||| ||| || | ||| || || ||||||||
Sbjct 904 GGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTG 845
Query 141614 GCGTGTCGGAGTACGAACACCAGACATAATTGGTGTTGGCAATGAAATCTTTTTAGTAGA 141673
|| || || ||||| || |||||||| ||||| || |||| ||||| || |||||
Sbjct 844 ACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAGGTAGA 785
Query 141674 AACTGCATCATAGAAACG 141691
|| || |||||||||||
Sbjct 784 AATGGCGTCATAGAAACG 767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 538271601245120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |