Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq236 165 9e-36 >seq236 Length=1144 Score = 165 bits (182), Expect = 9e-36 Identities = 269/384 (70%), Gaps = 14/384 (4%) Strand=Plus/Plus Query 136355 CGTTTCTATGATGCAGTTTCTACTAAAAAGATTTCATTGCCAACACCAATTATGTCTGGT 136414 ||||||||||| || ||||||| || ||||| |||| || ||||| |||||||| Sbjct 767 CGTTTCTATGACGCCATTTCTACCTTCAAAATTTCTCTGCCTACGCCAATCATGTCTGGC 826 Query 136415 GTTCGTACTCCAACCCGCCAGTTCAGTTCATGCGTAGTTATTGAAGGTGGTGATAGTCTT 136474 || ||||| |||||||| |||||||| || || || | || ||| |||||||||| || Sbjct 827 GTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGCTGATCGAATGTGGTGATAGCCTG 886 Query 136475 AATTCAATTAACGAAGCCGCTGCATCAATTACGAAATACATTAGTAAGCGTGCTGGTATT 136534 |||| ||||| | || | | ||| ||||||| || | ||||| || || Sbjct 887 GATTCGATTAATGCCACCTCAAGCGCCATTGTGAAATACGTTTCCCAACGTGCGGGGATC 946 Query 136535 GGTATTAATGCGGGGATGATTCGTGCAGAAGGATCAAAAATTGGATT--CGGTGAAGTCA 136592 || || || ||||| || ||||| | || | | |||| ||||| || | Sbjct 947 GGCATCAACGCGGGCCGCATCCGTGC-GTTGGGT----AGCCCGATTCGCGGTGGAG--A 999 Query 136593 AG-----CATACTGGTGTTATTCCTTTCTGGAAACACTTCCAAACCGCAGTTAAGTCATG 136647 || ||||| || ||||| |||| || || ||||| ||||| || || || || Sbjct 1000 AGCTTTCCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACCGCCGTAAAATCCTG 1059 Query 136648 CTCCCAAGGCGGAGTCCGTGGTGGTGCAGCTACACTGTATTATCCGATGTGGCACTTGGA 136707 ||| || ||||| || ||||||||||| || || ||| || ||||||||||| |||| Sbjct 1060 CTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTACCCGATGTGGCATCTGGA 1119 Query 136708 AGTTGAAAACCTCCTCGTACTTAA 136731 ||| |||| ||| || || || || Sbjct 1120 AGTCGAAAGCCTGCTGGTGCTGAA 1143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539826596716880