Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_031095.1
Length=168758
Score E
Sequences producing significant alignments: (Bits) Value
seq236 165 9e-36
>seq236
Length=1144
Score = 165 bits (182), Expect = 9e-36
Identities = 269/384 (70%), Gaps = 14/384 (4%)
Strand=Plus/Plus
Query 136355 CGTTTCTATGATGCAGTTTCTACTAAAAAGATTTCATTGCCAACACCAATTATGTCTGGT 136414
||||||||||| || ||||||| || ||||| |||| || ||||| ||||||||
Sbjct 767 CGTTTCTATGACGCCATTTCTACCTTCAAAATTTCTCTGCCTACGCCAATCATGTCTGGC 826
Query 136415 GTTCGTACTCCAACCCGCCAGTTCAGTTCATGCGTAGTTATTGAAGGTGGTGATAGTCTT 136474
|| ||||| |||||||| |||||||| || || || | || ||| |||||||||| ||
Sbjct 827 GTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTGCTGATCGAATGTGGTGATAGCCTG 886
Query 136475 AATTCAATTAACGAAGCCGCTGCATCAATTACGAAATACATTAGTAAGCGTGCTGGTATT 136534
|||| ||||| | || | | ||| ||||||| || | ||||| || ||
Sbjct 887 GATTCGATTAATGCCACCTCAAGCGCCATTGTGAAATACGTTTCCCAACGTGCGGGGATC 946
Query 136535 GGTATTAATGCGGGGATGATTCGTGCAGAAGGATCAAAAATTGGATT--CGGTGAAGTCA 136592
|| || || ||||| || ||||| | || | | |||| ||||| || |
Sbjct 947 GGCATCAACGCGGGCCGCATCCGTGC-GTTGGGT----AGCCCGATTCGCGGTGGAG--A 999
Query 136593 AG-----CATACTGGTGTTATTCCTTTCTGGAAACACTTCCAAACCGCAGTTAAGTCATG 136647
|| ||||| || ||||| |||| || || ||||| ||||| || || || ||
Sbjct 1000 AGCTTTCCATACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACCGCCGTAAAATCCTG 1059
Query 136648 CTCCCAAGGCGGAGTCCGTGGTGGTGCAGCTACACTGTATTATCCGATGTGGCACTTGGA 136707
||| || ||||| || ||||||||||| || || ||| || ||||||||||| ||||
Sbjct 1060 CTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACGTTGTTCTACCCGATGTGGCATCTGGA 1119
Query 136708 AGTTGAAAACCTCCTCGTACTTAA 136731
||| |||| ||| || || || ||
Sbjct 1120 AGTCGAAAGCCTGCTGGTGCTGAA 1143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539826596716880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |