Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_031128.1
Length=158081
Score E
Sequences producing significant alignments: (Bits) Value
seq236 118 1e-21
>seq236
Length=1144
Score = 118 bits (130), Expect = 1e-21
Identities = 200/286 (70%), Gaps = 8/286 (3%)
Strand=Plus/Minus
Query 17375 CCACCACGGATACCGCCTTGAGAGCAAGACTTCAGGGCACCAGTC---AAATACTTGATG 17431
|||||||| | ||||| |||||||| || || | ||| ||| |||| |||| |
Sbjct 1083 CCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCG---GTCTGGAAATGCTTGTAG 1027
Query 17432 AATGGAAC-CAGACCTGTATGGACCATTTCCCCTTTACGGATAGGGCTACCGATGCCACG 17490
|| |||| ||| || ||||||| ||| || || || |||||||| | ||||
Sbjct 1026 AACGGAATGCAG-CCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACG 968
Query 17491 AATTGCCCCAACATCGAATCCGATGCCAGCACGTTTGGAAACATAATCCACGATGCTTTT 17550
|| || | | || ||||| || ||||||| |||||| || | ||| ||| |
Sbjct 967 GATGCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCT 908
Query 17551 CGCAGTGGCATTAATTGAGTCCAATGTATCACCAGTTTTGATTAATACACAAGAGCTGAA 17610
| ||||||||||| || |||| |||||||| || ||| | ||||| ||||||||
Sbjct 907 TGAGGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAA 848
Query 17611 CTGTCGGGTCGGGGTGCGGACGCCGGACATAATAGGTGTTGGAAGA 17656
||| ||||| || || || ||||| ||||| || || || || |||
Sbjct 847 CTGACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGA 802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505664690025560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |