Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_031928.1
Length=169936
Score E
Sequences producing significant alignments: (Bits) Value
seq236 113 5e-20
>seq236
Length=1144
Score = 113 bits (124), Expect = 5e-20
Identities = 233/347 (67%), Gaps = 0/347 (0%)
Strand=Plus/Minus
Query 143436 TTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 143495
|||||| || ||||| |||| ||||||| |||||| || || || | || |||||
Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085
Query 143496 GCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAA 143555
|| ||||| | || || || || || ||||| || || ||||||||||| || ||||
Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025
Query 143556 TGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCACGAAT 143615
||||| |||||||| |||| || || ||| | ||| ||||| ||
Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGAT 965
Query 143616 CATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTATTGAGTTAGC 143675
|| ||||||| || || || ||||||| |||| ||||| | || | | | |
Sbjct 964 GCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGA 905
Query 143676 AGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGAACTAAATTG 143735
|| ||||| || | ||| || || ||| || | |||||| || || || ||
Sbjct 904 GGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTG 845
Query 143736 ACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAATGAAA 143782
||||||||| ||||| | |||| ||| || || || || | ||||
Sbjct 844 ACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAA 798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543595700967360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |