Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq7901 84.2 3e-11 >seq7901 Length=80373 Score = 84.2 bits (92), Expect = 3e-11 Identities = 107/147 (73%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 17789 TAGCTCAGCTGGATAGAGCAGGGTTTTTGTAAAGCTCAGGTCACCCGTTCAAGTCGGGTA 17848 |||||||||||| ||||||| || || ||| || |||| |||| |||| Sbjct 38360 TAGCTCAGCTGGTTAGAGCACTGTGTTGATAACGCAGGGGTCGTAGGTTCGAGTCCTACC 38419 Query 17849 AGTGGCTCCAG----GGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATG 17904 || | |||| ||| |||||||||||||| ||||| ||||||||||||||||| | Sbjct 38420 AGACCCACCAGTTTGGGGGATTAGCTCAGTTGGGAGAGCACCTGCTTTGCAAGCAGGGGG 38479 Query 17905 TCAGCGGTTCGAGTCCGCTATTCTCCA 17931 || |||||||| ||| || ||||| Sbjct 38480 TCGTCGGTTCGATCCCGTCATCCTCCA 38506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596228778149360