Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7521 152 4e-32 seq7517 143 2e-29 seq7535 116 3e-21 >seq7521 Length=12184106 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || |||||| ||||| || |||||| ||||||||||| |||| Sbjct 8321344 CCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 8321285 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| ||||| ||||||| |||||||||||||| || Sbjct 8321284 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 8321225 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||||| ||| |||||| ||||| | | || || || | || || ||| Sbjct 8321224 ATTCCTTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 8321165 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | ||||| ||||| ||||||||||| || |||||||| ||||| Sbjct 8321164 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 8321118 Score = 120 bits (132), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| || |||||||| |||| ||| ||| | || ||||||||||| ||||| |||| Sbjct 9381156 CCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 9381215 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 ||| |||||||||||||| || | |||||||| ||| ||||| ||||| | Sbjct 9381216 TCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCT 9381275 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || ||||| | | || ||||| | || || ||||| || ||||| || ||||||| Sbjct 9381276 CGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGA 9381335 Query 44328 AGATTTGCATG 44338 | || |||||| Sbjct 9381336 AAATCTGCATG 9381346 >seq7517 Length=11427604 Score = 143 bits (158), Expect = 2e-29 Identities = 149/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| |||| || || |||| ||||||||||| ||||| || Sbjct 2898475 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCTTCCAGCTGCTTACCGGCGAA 2898416 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||||||||||||||||| ||| | || ||||| ||| ||||| ||||| || Sbjct 2898415 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-GT 2898357 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | | || ||||||| ||| || ||||| || || || ||||||| Sbjct 2898356 TCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCA 2898297 Query 44325 CGAAGATTTGCAT 44337 ||||||| ||||| Sbjct 2898296 CGAAGATCTGCAT 2898284 Score = 143 bits (158), Expect = 2e-29 Identities = 152/195 (78%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||| ||||||||||| |||| | || | || |||| ||||||||||| ||||| | Sbjct 2898703 CTCCTTCTGGATGTTGTAGTCGGACAAGGTA-CGTCCGTCTTCCAGCTGCTTACCGGCGA 2898645 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 ||||||||||||||||||||| ||| | || ||||| ||| ||||| ||||| | Sbjct 2898644 AGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-G 2898586 Query 44265 TTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 ||| | || ||||| | | || ||||||| ||| || ||||| || || || |||||| Sbjct 2898585 TTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTC 2898526 Query 44324 ACGAAGATTTGCATG 44338 |||||||| |||||| Sbjct 2898525 ACGAAGATCTGCATG 2898511 Score = 143 bits (158), Expect = 2e-29 Identities = 152/195 (78%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||| ||||||||||| |||| | || | || |||| ||||||||||| ||||| | Sbjct 2898931 CTCCTTCTGGATGTTGTAGTCGGACAAGGTA-CGTCCGTCTTCCAGCTGCTTACCGGCGA 2898873 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 ||||||||||||||||||||| ||| | || ||||| ||| ||||| ||||| | Sbjct 2898872 AGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-G 2898814 Query 44265 TTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 ||| | || ||||| | | || ||||||| ||| || ||||| || || || |||||| Sbjct 2898813 TTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTC 2898754 Query 44324 ACGAAGATTTGCATG 44338 |||||||| |||||| Sbjct 2898753 ACGAAGATCTGCATG 2898739 >seq7535 Length=3646130 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| ||||| || |||||| |||||||| || || | || ||| | || ||| Sbjct 875826 ACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 875885 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| |||||||||||||| || | || ||||| ||| Sbjct 875886 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 875945 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | || || || | | || || |||| || || |||||| Sbjct 875946 ATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACTTCCAGGGTGATGGTCTTT 876005 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || |||||||| || ||||| Sbjct 876006 CCGGTCAGAGTTTTCACGAAAATCTGCAT 876034 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| ||||| ||| |||||| |||||||| || || | || ||| | || ||| Sbjct 876054 ACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 876113 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||| |||||||||||||| || | || ||||| ||| Sbjct 876114 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 876173 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | || || || | | || ||||| | || || |||||| Sbjct 876174 ATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCGAGGGTGATGGTCTTT 876233 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || |||||||| || ||||| Sbjct 876234 CCGGTCAGAGTTTTCACGAAAATCTGCAT 876262 Score = 82.4 bits (90), Expect = 5e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| ||||| || ||||| |||||||| || || | || ||| | || ||| Sbjct 876282 ACCAGATGAAGGGTCGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 876341 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||| |||||||||||||| || | || ||||| ||| Sbjct 876342 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 876401 Query 44249 ATCTTCTGCTTCA 44261 |||||| ||||| Sbjct 876402 ATCTTCGCCTTCA 876414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359944240343457