Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq7521 152 4e-32
seq7517 143 2e-29
seq7535 116 3e-21
>seq7521
Length=12184106
Score = 152 bits (168), Expect = 4e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || |||||| ||||| || |||||| ||||||||||| ||||
Sbjct 8321344 CCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 8321285
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| ||||| ||||||| |||||||||||||| ||
Sbjct 8321284 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 8321225
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| |||||||| ||| |||||| ||||| | | || || || | || || |||
Sbjct 8321224 ATTCCTTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 8321165
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | ||||| ||||| ||||||||||| || |||||||| |||||
Sbjct 8321164 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 8321118
Score = 120 bits (132), Expect = 2e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| || |||||||| |||| ||| ||| | || ||||||||||| ||||| ||||
Sbjct 9381156 CCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 9381215
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267
||| |||||||||||||| || | |||||||| ||| ||||| ||||| |
Sbjct 9381216 TCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCT 9381275
Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
| || ||||| | | || ||||| | || || ||||| || ||||| || |||||||
Sbjct 9381276 CGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGA 9381335
Query 44328 AGATTTGCATG 44338
| || ||||||
Sbjct 9381336 AAATCTGCATG 9381346
>seq7517
Length=11427604
Score = 143 bits (158), Expect = 2e-29
Identities = 149/193 (77%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| ||||||||||| |||| || || |||| ||||||||||| ||||| ||
Sbjct 2898475 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCTTCCAGCTGCTTACCGGCGAA 2898416
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|||||||||||||||||||| ||| | || ||||| ||| ||||| ||||| ||
Sbjct 2898415 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-GT 2898357
Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
|| | || ||||| | | || ||||||| ||| || ||||| || || || |||||||
Sbjct 2898356 TCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCA 2898297
Query 44325 CGAAGATTTGCAT 44337
||||||| |||||
Sbjct 2898296 CGAAGATCTGCAT 2898284
Score = 143 bits (158), Expect = 2e-29
Identities = 152/195 (78%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204
|||||| ||||||||||| |||| | || | || |||| ||||||||||| ||||| |
Sbjct 2898703 CTCCTTCTGGATGTTGTAGTCGGACAAGGTA-CGTCCGTCTTCCAGCTGCTTACCGGCGA 2898645
Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264
||||||||||||||||||||| ||| | || ||||| ||| ||||| ||||| |
Sbjct 2898644 AGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-G 2898586
Query 44265 TTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323
||| | || ||||| | | || ||||||| ||| || ||||| || || || ||||||
Sbjct 2898585 TTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTC 2898526
Query 44324 ACGAAGATTTGCATG 44338
|||||||| ||||||
Sbjct 2898525 ACGAAGATCTGCATG 2898511
Score = 143 bits (158), Expect = 2e-29
Identities = 152/195 (78%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204
|||||| ||||||||||| |||| | || | || |||| ||||||||||| ||||| |
Sbjct 2898931 CTCCTTCTGGATGTTGTAGTCGGACAAGGTA-CGTCCGTCTTCCAGCTGCTTACCGGCGA 2898873
Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264
||||||||||||||||||||| ||| | || ||||| ||| ||||| ||||| |
Sbjct 2898872 AGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-G 2898814
Query 44265 TTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323
||| | || ||||| | | || ||||||| ||| || ||||| || || || ||||||
Sbjct 2898813 TTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTC 2898754
Query 44324 ACGAAGATTTGCATG 44338
|||||||| ||||||
Sbjct 2898753 ACGAAGATCTGCATG 2898739
>seq7535
Length=3646130
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||| ||||| || |||||| |||||||| || || | || ||| | || |||
Sbjct 875826 ACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 875885
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||||| |||||||||||||| || | || ||||| |||
Sbjct 875886 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 875945
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||||| | | || || || | | || || |||| || || ||||||
Sbjct 875946 ATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACTTCCAGGGTGATGGTCTTT 876005
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || || |||||||| || |||||
Sbjct 876006 CCGGTCAGAGTTTTCACGAAAATCTGCAT 876034
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||| ||||| ||| |||||| |||||||| || || | || ||| | || |||
Sbjct 876054 ACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 876113
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||||| |||||||||||||| || | || ||||| |||
Sbjct 876114 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 876173
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||||| | | || || || | | || ||||| | || || ||||||
Sbjct 876174 ATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCGAGGGTGATGGTCTTT 876233
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || || |||||||| || |||||
Sbjct 876234 CCGGTCAGAGTTTTCACGAAAATCTGCAT 876262
Score = 82.4 bits (90), Expect = 5e-11
Identities = 98/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||| ||||| || ||||| |||||||| || || | || ||| | || |||
Sbjct 876282 ACCAGATGAAGGGTCGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 876341
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||||| |||||||||||||| || | || ||||| |||
Sbjct 876342 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 876401
Query 44249 ATCTTCTGCTTCA 44261
|||||| |||||
Sbjct 876402 ATCTTCGCCTTCA 876414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359944240343457
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |