Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq9607 127 3e-24 >seq9607 Length=27561 Score = 127 bits (140), Expect = 3e-24 Identities = 273/407 (67%), Gaps = 22/407 (5%) Strand=Plus/Plus Query 155739 GCCGTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAATTTTTAGT- 155797 || || ||||| || || |||||||| ||||||| |||||| ||||| |||||||||| Sbjct 23289 GCGGTTGATTGCGCTGCACGTACCAATCCTTCCAGTTCAGCACCGCTAAAATTTTTAGTC 23348 Query 155798 -TTCAACGGCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAGATTTCAT-- 155854 || || | | | ||||||||||| | |||||| | || ||||| Sbjct 23349 TTTTGAC--CAAGCTCGCGCAAGTCTACGTCAGGAGCTAACTTTTTAAACTCCTTCATGC 23406 Query 155855 -TTTAGCAACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTT 155913 | ||| | || | || |||||||| | ||| || | ||||| || | | |||| Sbjct 23407 GTCTAGTA---TGTATATTCAAAATTTGCACACGACCTTCTTCATTAGGAAGACTGATTT 23463 Query 155914 CTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGT 155973 | || | | ||| | || ||||||||||| ||||||||||| || | || || | Sbjct 23464 CCATTTGAACTTCTAGACGACCAGGTCTTAACAATGCTTCGTCTATCATATCTCTTCGAT 23523 Query 155974 TGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATA 156033 ||||||| || || | |||||||||||||| || ||||| |||||||| | ||| | Sbjct 23524 TGGTCATTCCAATTACCAAAATGTTGTTTAATTGCTCAACACCATCTATTTTTGCCAACA 23583 Query 156034 ATTGATTGACTACGGCGTCGTGC------------GTGGCGTTATCACCGCGTTTTTTAC 156081 ||| ||||| || | || ||| | || | ||| || ||||| Sbjct 23584 GTTGGTTGACAACCGTATCATGCACACCAGAATTTCCGCCGACAGTACCACGAGCTTTAC 23643 Query 156082 ACAGAGCATCTATTTCATCGAAGACGATAACGTGTAATCCGCTGGCT 156128 | | ||||||||||||||||| | || | |||||| || || ||| Sbjct 23644 AAATTGCATCTATTTCATCGAAAATTATTATGTGTAAACCACTTGCT 23690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666987471272760