Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq17588 84.2 2e-11
>seq17588
Length=255762
Score = 84.2 bits (92), Expect = 2e-11
Identities = 183/266 (69%), Gaps = 6/266 (2%)
Strand=Plus/Plus
Query 118930 TCGAATTTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTG 118988
||| | |||||||| || || || || |||| ||||||||||| || ||| |||||
Sbjct 177857 TCGTAGTTCATGTAGCGAATTTTGCCGAATATTTCGCGCTCCTTCCA-GCCCTGGTCGTG 177915
Query 118989 GAGTCCTGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACT 119047
|| || || | | ||| | || || ||||| ||||| || || ||||| | |||
Sbjct 177916 GATGCCCGCGATCGACCACATGCACCCGACGTACCCGTTCGGGTCGCGCCCGTCCAGACT 177975
Query 119048 CGTACTTATCGTTTAAGTAGATA-CAGACGCTTAACGCACTTTCCGGAGTCTTACTCCAT 119106
||| |||||| | |||||| | | | | | ||| ||||| || ||||
Sbjct 177976 -GTAGCGATCGTTCAGGTAGATGGCCGTCTCG-AGCGCCTCCTCCGGCGTTCGCGTCCAC 178033
Query 119107 TCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATC 119166
|||||||| || || ||||||||||| || | | | |||||||| || ||||| | |
Sbjct 178034 TCCAGTATCTTCTTCGCCCAGTACATGCGCAGAAAGCCGTGCATCTTGGCCTCGCGCACC 178093
Query 119167 ATCTGAAGTTGTGCGGTGTTCCATAG 119192
||||| || || || | ||||| ||
Sbjct 178094 ATCTGCAGCTGGGCCGCATTCCACAG 178119
Score = 84.2 bits (92), Expect = 2e-11
Identities = 183/266 (69%), Gaps = 6/266 (2%)
Strand=Plus/Plus
Query 118930 TCGAATTTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTG 118988
||| | |||||||| || || || || |||| ||||||||||| || ||| |||||
Sbjct 179739 TCGTAGTTCATGTAGCGAATTTTGCCGAATATTTCGCGCTCCTTCCA-GCCCTGGTCGTG 179797
Query 118989 GAGTCCTGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACT 119047
|| || || | | ||| | || || ||||| ||||| || || ||||| | |||
Sbjct 179798 GATGCCCGCGATCGACCACATGCACCCGACGTACCCGTTCGGGTCGCGCCCGTCCAGACT 179857
Query 119048 CGTACTTATCGTTTAAGTAGATA-CAGACGCTTAACGCACTTTCCGGAGTCTTACTCCAT 119106
||| |||||| | |||||| | | | | | ||| ||||| || ||||
Sbjct 179858 -GTAGCGATCGTTCAGGTAGATGGCCGTCTCG-AGCGCCTCCTCCGGCGTTCGCGTCCAC 179915
Query 119107 TCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATC 119166
|||||||| || || ||||||||||| || | | | |||||||| || ||||| | |
Sbjct 179916 TCCAGTATCTTCTTCGCCCAGTACATGCGCAGAAAGCCGTGCATCTTGGCCTCGCGCACC 179975
Query 119167 ATCTGAAGTTGTGCGGTGTTCCATAG 119192
||||| || || || | ||||| ||
Sbjct 179976 ATCTGCAGCTGGGCCGCATTCCACAG 180001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511194715551800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |