Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq17588 84.2 2e-11 >seq17588 Length=255762 Score = 84.2 bits (92), Expect = 2e-11 Identities = 183/266 (69%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 118930 TCGAATTTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTG 118988 ||| | |||||||| || || || || |||| ||||||||||| || ||| ||||| Sbjct 177857 TCGTAGTTCATGTAGCGAATTTTGCCGAATATTTCGCGCTCCTTCCA-GCCCTGGTCGTG 177915 Query 118989 GAGTCCTGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACT 119047 || || || | | ||| | || || ||||| ||||| || || ||||| | ||| Sbjct 177916 GATGCCCGCGATCGACCACATGCACCCGACGTACCCGTTCGGGTCGCGCCCGTCCAGACT 177975 Query 119048 CGTACTTATCGTTTAAGTAGATA-CAGACGCTTAACGCACTTTCCGGAGTCTTACTCCAT 119106 ||| |||||| | |||||| | | | | | ||| ||||| || |||| Sbjct 177976 -GTAGCGATCGTTCAGGTAGATGGCCGTCTCG-AGCGCCTCCTCCGGCGTTCGCGTCCAC 178033 Query 119107 TCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATC 119166 |||||||| || || ||||||||||| || | | | |||||||| || ||||| | | Sbjct 178034 TCCAGTATCTTCTTCGCCCAGTACATGCGCAGAAAGCCGTGCATCTTGGCCTCGCGCACC 178093 Query 119167 ATCTGAAGTTGTGCGGTGTTCCATAG 119192 ||||| || || || | ||||| || Sbjct 178094 ATCTGCAGCTGGGCCGCATTCCACAG 178119 Score = 84.2 bits (92), Expect = 2e-11 Identities = 183/266 (69%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 118930 TCGAATTTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTG 118988 ||| | |||||||| || || || || |||| ||||||||||| || ||| ||||| Sbjct 179739 TCGTAGTTCATGTAGCGAATTTTGCCGAATATTTCGCGCTCCTTCCA-GCCCTGGTCGTG 179797 Query 118989 GAGTCCTGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACT 119047 || || || | | ||| | || || ||||| ||||| || || ||||| | ||| Sbjct 179798 GATGCCCGCGATCGACCACATGCACCCGACGTACCCGTTCGGGTCGCGCCCGTCCAGACT 179857 Query 119048 CGTACTTATCGTTTAAGTAGATA-CAGACGCTTAACGCACTTTCCGGAGTCTTACTCCAT 119106 ||| |||||| | |||||| | | | | | ||| ||||| || |||| Sbjct 179858 -GTAGCGATCGTTCAGGTAGATGGCCGTCTCG-AGCGCCTCCTCCGGCGTTCGCGTCCAC 179915 Query 119107 TCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATC 119166 |||||||| || || ||||||||||| || | | | |||||||| || ||||| | | Sbjct 179916 TCCAGTATCTTCTTCGCCCAGTACATGCGCAGAAAGCCGTGCATCTTGGCCTCGCGCACC 179975 Query 119167 ATCTGAAGTTGTGCGGTGTTCCATAG 119192 ||||| || || || | ||||| || Sbjct 179976 ATCTGCAGCTGGGCCGCATTCCACAG 180001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511194715551800