Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq3126 98.7 8e-16 >seq3126 Length=198095 Score = 98.7 bits (108), Expect = 8e-16 Identities = 120/163 (74%), Gaps = 8/163 (5%) Strand=Plus/Minus Query 29051 AAGTCGCGGCCCTTGACGAGCAGCACGTACTCGCAGCGGTCGTACCAGCGGGCGTGTTGC 29110 || ||||||||||| | ||| ||| ||| | |||| | ||||||| |||||| ||| Sbjct 39553 AACTCGCGGCCCTTCATCAGCTGCAGGTAGTGGCAGTTGCTGTACCAGATGGCGTGCTGC 39494 Query 29111 TGCCACGGCGCGTCGTCGGGTTCCCAATCCTTCAGACCGCCGTCGCAGCAAAAGCA---- 29166 | |||||| ||||||| ||||||| |||||||| || ||| |||||| ||||| Sbjct 39493 TCCCACGGTTCGTCGTCCTGTTCCCAGTCCTTCAGCCCACCGCCGCAGCTGAAGCATTTC 39434 Query 29167 CCGCGTCTTGTCGCCCTGGCCAGTGTAAAAGAATCCGGCCTCG 29209 |||| |||| || || ||||| ||||| ||||| ||| Sbjct 39433 ACGCG----ATCGCTCTTCCCGGTGTAGAAGAAGCCGGCGTCG 39395 Score = 98.7 bits (108), Expect = 8e-16 Identities = 120/163 (74%), Gaps = 8/163 (5%) Strand=Plus/Plus Query 29051 AAGTCGCGGCCCTTGACGAGCAGCACGTACTCGCAGCGGTCGTACCAGCGGGCGTGTTGC 29110 || ||||||||||| | ||| ||| ||| | |||| | ||||||| |||||| ||| Sbjct 160813 AACTCGCGGCCCTTCATCAGCTGCAGGTAGTGGCAGTTGCTGTACCAGATGGCGTGCTGC 160872 Query 29111 TGCCACGGCGCGTCGTCGGGTTCCCAATCCTTCAGACCGCCGTCGCAGCAAAAGCA---- 29166 | |||||| ||||||| ||||||| |||||||| || ||| |||||| ||||| Sbjct 160873 TCCCACGGTTCGTCGTCCTGTTCCCAGTCCTTCAGCCCACCGCCGCAGCTGAAGCATTTC 160932 Query 29167 CCGCGTCTTGTCGCCCTGGCCAGTGTAAAAGAATCCGGCCTCG 29209 |||| |||| || || ||||| ||||| ||||| ||| Sbjct 160933 ACGCG----ATCGCTCTTCCCGGTGTAGAAGAAGCCGGCGTCG 160971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422082347950340