Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq19317 131 4e-25 >seq19317 Length=140919 Score = 131 bits (144), Expect = 4e-25 Identities = 266/392 (68%), Gaps = 16/392 (4%) Strand=Plus/Minus Query 253997 CGACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCT 254056 ||||||||| ||||||| | ||||||| ||||| || ||||| ||| || || || Sbjct 12900 CGACCTTCCGAATTTGCTGCTGTACGGTCCGCCCGGTACCGGCAAAACGAGCACGATTCT 12841 Query 254057 GGCGCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAA 254116 |||| ||||| ||||| ||||| | || | |||||| | |||||||| || Sbjct 12840 GGCGGCCGCCCGCCAGCTGTTCGGCGACATGTTCAAG---GAGCGCATCCTCGAGCTTAA 12784 Query 254117 CGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGAT 254176 ||| || ||||| || || | | ||| ||||| |||| | ||||| ||| | || | Sbjct 12783 CGCATCGGACGACCGAGGCATTGCCGTGATCCGCAACAAAGTGAAGACGTTCGCGCAGCT 12724 Query 254177 GTCGATTTC--GT---CGTTCC------AACCCGGCTGTCCGCCTTTCAAGCTCGTGATC 254225 || || |||||| || || |||||| || ||||| |||| ||| Sbjct 12723 CACGGCCAGCGGTACCCGTTCCGATGGGAAACC--CTGTCCACCGTTCAAAATCGTCATC 12666 Query 254226 CTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAG 254285 || |||||||||||| | ||||| || || ||| |||| | || || || |||||| Sbjct 12665 CTCGACGAGGCGGACGCGATGACTCACGCGGCCCAGGCCGCGTTGCGTCGCACAATGGAG 12606 Query 254286 ACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCC 254345 | | | | || || || || |||||||||||||||||||| ||||||| Sbjct 12605 AAGGAAACGAAAACCACCCGGTTCTGTTTGGTGTGCAACTACGTGTCGCGCATCATCGAA 12546 Query 254346 CCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377 ||| | | || || ||| ||||||| || || Sbjct 12545 CCGATCACATCGCGCTGCACCAAGTTCCGGTT 12514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073293618976320