Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 933 0.0
>seq2173
Length=41539
Score = 933 bits (1034), Expect = 0.0
Identities = 1375/1944 (71%), Gaps = 23/1944 (1%)
Strand=Plus/Minus
Query 22103 GTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162
|| ||||| || || ||||| || || ||| |||| || || ||||| | ||| ||||||
Sbjct 18575 GTTTTGTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTCGTGCGCAAATAGTACATG 18516
Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222
|| |||||||| |||||||||||||||| || || |||||||||| || || || ||
Sbjct 18515 CCAGTCTTCAGGCCCATCTTCCACGCGTGGAAGTGCATCGACGTCAGCTTGCCGTAGTTC 18456
Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282
|| ||| || | ||||||||||| ||| ||||| ||||| || || |||||
Sbjct 18455 GGTTCCGCCACGTGGATGTTGAACGACTGCGACTGGTCGATGAACGCACCCCGGTCGGCT 18396
Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342
||||| | || | || || ||| || ||||| || || |||||||| | | |
Sbjct 18395 GCCATCTGGATGCACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACT 18336
Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402
|| |||||| ||||| |||||| || ||||| | | | ||| || ||
Sbjct 18335 TCCTTCGGTATTTGCTCGATGTTCTGGATCGAGCCGTTGTGGGCCAGGATTGTGTTCTTC 18276
Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACT 22462
|| ||||| ||||| |||| | ||||| ||| |||| ||| || ||||||||||
Sbjct 18275 ATATCATCGTCCCACAGACCGTGCGTGGTCAGATCCTTGATCAGGTGGTGGTTCACCACC 18216
Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522
||||||||||| |||| ||||| || | ||||| |||||| || |||| ||||| ||
Sbjct 18215 TGAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGAACGAC 18156
Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582
|| ||||| |||| || || || |||||||| |||||||||||||| | ||| || |||
Sbjct 18155 TCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAG 18096
Query 22583 TTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGAC 22642
|| | || ||||| || | ||| || ||| ||| ||| ||| | |||||| || |
Sbjct 18095 TTGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACAGGTC---C 18039
Query 22643 GGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCG 22702
| || || |||| |||||| ||||| |||| | ||| ||| |||| || |||
Sbjct 18038 GTCGGTACCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTCACCGGAGACCCCTCG 17979
Query 22703 TACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAA 22762
||||| |||||||| || | ||||| | |||||||| || |||| ||| |||||
Sbjct 17978 TACGTCTCGTACGGTCCCTCCTGGGCGGCCATCTCGCAGCTAGCTTCCAGCGCACCGTAG 17919
Query 22763 TATATAGTCTCGAAGATTTTCTTGTTCA-ATTCGGCGGCGGCGACGCTTTCGTACGGCAT 22821
|| || ||||| || || | || || | ||| ||| | || | || |||||||| |
Sbjct 17918 TAGATGGTCTCAAATATCTGCTGATTGAGCTTCTGCGCCTCCG-CACTCTCGTACGGGAA 17860
Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881
| ||||| | |||||| || ||||||||||| ||||| ||||||||||| ||||
Sbjct 17859 GCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGACGGTGGCG 17800
Query 22882 CAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941
|| ||||| || || || |||| || || | ||| ||||| | |||||||
Sbjct 17799 CATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAGTTCACGTCGATAATCTTGTTCAA 17740
Query 22942 GTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTG 23001
||| | ||||| ||||| | || | || || | ||| || | |
Sbjct 17739 GTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAAATC--ATACGTACGGTCG 17682
Query 23002 TAC--AACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTG 23059
|| || ||| |||| | || |||||||| || ||||| || ||||| ||||| ||
Sbjct 17681 GACTGGACGAACATGTTCAACGCAATCGAGGCCAGGTTGCACACCGCCACTTCGTCCTTC 17622
Query 23060 GACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTC 23119
|||| |||||| ||||| ||||| || || || ||||| || ||||| | || |
Sbjct 17621 GACGAGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGATGGTGCCGATGTTTTGC 17562
Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179
||||||||||| |||||||||| |||||||| ||||||||||| ||||||||| |||
Sbjct 17561 TGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTACGGTACGCCCGTCTCCACC 17502
Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCT 23239
|| || ||||||||||| ||||| | ||| || | || | || | | | | |||
Sbjct 17501 TGGGATTCGATGATCGCAAACCACAGATCCTGCGCCTTTACCTGGCGGATGAAGCGGCCC 17442
Query 23240 TCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCG 23299
|| | ||| || ||||||| || || || | || | | ||||||| |||
Sbjct 17441 TCCTTCTCATAGCCCGTGTACAACTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCG 17382
Query 23300 GGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAA 23359
|| | | ||| ||||| | ||||||| || || || ||||| ||| ||
Sbjct 17381 GGACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAAC 17322
Query 23360 AGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTG 23419
|||||||| ||||| || |||||||||| || || |||||||||||||| |||||||||
Sbjct 17321 AGATCCGGAATCCAGAGCGCGTAGAACATGTCCCGTGCGCGCACCTCCTCCTTGCCGGTG 17262
Query 23420 TTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCA 23479
|| || |||| ||||||||| || ||||| || | ||||||||||| ||||| | ||||
Sbjct 17261 TTTTTCTTCAGATCCAAAAACTCAAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCA 17202
Query 23480 AACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACT 23539
||||| ||||| | |||||||||||||||||||||||| || |||||||||||||||||
Sbjct 17201 AACGCACCCGGCCGCTTATTGCCGCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACG 17142
Query 23540 CTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTT 23599
| ||||||||||| | ||||| || ||| ||| | | || || ||
Sbjct 17141 CGCAGCATCGGCACCAACCCGTTCGAAATTCCGTTCGTGCCGGAGATGTACGTTCCCTTC 17082
Query 23600 GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCAT 23659
|| || | | ||| |||| | || ||||| ||| | || || || |||| |||||
Sbjct 17081 GCCCGGATGCAGTGCACGTTCAGCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCAC 17022
Query 23660 TGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC---TTTGGTCGCGACCAAGAAA 23716
|| ||||| |||||||||||||| ||||||||||| || ||||| | || ||
Sbjct 17021 TGCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCGTCGGACATGGTC---AGCAGAAAG 16965
Query 23717 CACGAAGACATTTG----CGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTG 23772
|| || |||| || |||| ||||||| |||| ||||| ||||| ||| ||
Sbjct 16964 CAAGACGACAGCTGGGGACGCT----GCGTAGCCGCCGCGAACATGGTCGGCGAGGCATG 16909
Query 23773 CGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCC 23832
|||||||| | | ||| | ||||| ||||| ||||| || || || |||||| ||
Sbjct 16908 GGTAAAGTAACGCTCCGAGAGCAGATTATACGTCTCGATCGCAGCCTCGATGTCCGTGCC 16849
Query 23833 GTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTT 23892
|| || ||||||||||||||||||| ||| | || || |||||||| | ||| ||
Sbjct 16848 ATGGATGCCGATGGCGACGCGCATCAGCATATGCTGCGGCCTCTCGACAATCTTGCCCTT 16789
Query 23893 AATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTC 23952
|| || |||| ||| ||||| | || ||||| || || ||||||| || |||||
Sbjct 16788 GATCTTCAACAAATACGAACGCTCCAGGGTTTTGAAGCCGAAATAGTTGTACCCGAAGTC 16729
Query 23953 ACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATGTTGTAATG 24012
|||||||| | || |||||||| | ||||| || || || ||| | | ||| ||
Sbjct 16728 ACGATCGTAAATAATAGCCGAATTTAGACGGTCTGCGTTCGCCATGATCACCTCGTAGTG 16669
Query 24013 AAAATTCGATATCATCGGCGTTTT 24036
||| | ||| ||||| || | |||
Sbjct 16668 AAAGTCCGAAATCATGGGTGATTT 16645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445574915470800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |