Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 284 2e-71
>seq2173
Length=41539
Score = 284 bits (314), Expect = 2e-71
Identities = 1186/1855 (64%), Gaps = 34/1855 (2%)
Strand=Plus/Minus
Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798
||||| ||||| || | ||||||||| || || || || || | |||| ||| |||
Sbjct 18542 GCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAG 18483
Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858
||||| ||| || ||| || |||| || || | ||||| || | || ||
Sbjct 18482 TGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGAC 18423
Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918
|| |||||||| || |||| ||| || ||||| | ||| ||| || | ||| |||
Sbjct 18422 TGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCACGTTTTCACCGAAATCTCC 18363
Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTG-----TATTCTGAATG 78972
|||| ||||| || | |||| | | |||| | | |||| | ||||| ||
Sbjct 18362 CAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTA---TTTGCTCGATGTTCTGGATC 18306
Query 78973 GATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTT 79032
|| || | |||| || | ||||| || || || | ||| | | |||
Sbjct 18305 GAGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGTGCGTGGTC 18246
Query 79033 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 79092
| | | | | || || | || || || ||||| || || |||| || | ||| ||
Sbjct 18245 AGATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTG 18186
Query 79093 TAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGAT 79152
|||| || ||||| || || | ||| || || || ||||||||||| || || ||
Sbjct 18185 TAAACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAA 18126
Query 79153 GCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCT 79212
||||| ||||| || || | || | || | | ||||| | || || ||
Sbjct 18125 GCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCC 18066
Query 79213 TTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGA 79272
|| || | |||||| ||| || || | ||| || ||||| | || || || |||
Sbjct 18065 TTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGA 18006
Query 79273 ATACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAA 79331
|| || || || | || | || || ||| || || || ||||| |||| |||| |
Sbjct 18005 ATGCCCTTGCTCACCGGA-GACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGGCCAT 17947
Query 79332 TTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATC 79391
|| || || || || | || ||||| || ||||| || || |||| || |||||| |
Sbjct 17946 CTCGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGAGCTT 17887
Query 79392 TTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTG 79451
|| || || || || | || | | | || ||||| || || | || ||
Sbjct 17886 CTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTG 17827
Query 79452 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATA 79511
|| || |||||||| || | || | | | || || | ||||| || | || ||
Sbjct 17826 GACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTA 17767
Query 79512 ATAATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCCTT 79568
| || | || ||||| || || | || | | || ||| ||| | || || ||
Sbjct 17766 GAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATT---TTGGCTACCTCTTT 17710
Query 79569 TAGTTTGAGAAAATCAAATCGTCCA-TCT-ATT--ACAAACATGTTCAACGCGACAGATG 79624
|| || |||||| | ||| | || | | || |||||||||||||| | || |
Sbjct 17709 CAGCTTCGCGAAATCATA-CGTACGGTCGGACTGGACGAACATGTTCAACGCAATCGAGG 17651
Query 79625 CCAGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATTTCAGTGCAGAG 79682
|||| || || || || || || | | || || || | | || || ||||| ||
Sbjct 17650 CCAGGTTGCACACCGCCACTTCGTC--CTTCGACGAGTACTCCACAATCTCGGTGCAAAG 17593
Query 79683 GTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 79742
|||| ||||| ||||| || | ||||| || || || || || ||||| |||||
Sbjct 17592 GTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGTCCTT 17533
Query 79743 ATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 79802
|| || ||| |||| || || || | ||| ||||| || ||||| ||| | |
Sbjct 17532 GTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACAGATC 17473
Query 79803 TCGAGCCTTTA--TTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT 79860
| ||||||| | || || | | || | || || || || ||
Sbjct 17472 CTGCGCCTTTACCTGGCGGA--TGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAACTTC 17415
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|||||||| || ||||| |||| | ||||| ||||| |||| || |||||||| |
Sbjct 17414 TCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTC 17355
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980
||| | | | ||| || || | ||| || ||||| |||||||| || || ||
Sbjct 17354 CACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAGAAC 17295
Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
| || | | | |||||| || || || || || || ||||| | ||| | |
Sbjct 17294 ATGTCCCGTGCGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCAAAC 17235
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
| ||| |||||||| |||| ||| ||||| | | ||||| || || || || |||
Sbjct 17234 ACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCC 17175
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
||||| | ||| | || ||||| || || || | || ||| || | | || || ||
Sbjct 17174 TGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAA 17115
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 80218
| || || || |||||||| || |||| | || || || | | | || | | |
Sbjct 17114 ATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCA--GCC 17057
Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278
| || || || || || ||||| | |||||| | || | ||| || |||||||| |
Sbjct 17056 CGATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCTT 16997
Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 80338
| ||||| || || |||| | || ||||| || |||| ||| |||| ||
Sbjct 16996 CGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTAG 16937
Query 80339 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 80398
|||| || | ||| || || || || ||||| | || || || ||||| ||||
Sbjct 16936 CCGCCGCGAACATGGTCGGCGAGGCATGGGTAAAGTAACGCTCCGAGAGCAGATTATACG 16877
Query 80399 TCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGT 80458
|||| || || | || || ||| ||| || || | ||||| ||||| | ||| |
Sbjct 16876 TCTCGATCGCAGCCTCGATGTCCGTGCCATGGATGCCGATGGCGACGCGCATCAGCATAT 16817
Query 80459 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTT 80518
|||| || || || || |||||| || || |||||||| || || |||| ||||
Sbjct 16816 GCTGCGGCCTCTCGACAATCTTGCCCTTGATCTTCAACAAATACGAACGCTCCAGGGTTT 16757
Query 80519 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573
| || || ||||||||||| ||||| || |||||||||||| |||| || ||
Sbjct 16756 TGAAGCCGAAATAGTTGTACCCGAAGTCACGATCGTAAATAATAGCCGAATTTAG 16702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 717960258658600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |