Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2173 284 2e-71 >seq2173 Length=41539 Score = 284 bits (314), Expect = 2e-71 Identities = 1186/1855 (64%), Gaps = 34/1855 (2%) Strand=Plus/Minus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 ||||| ||||| || | ||||||||| || || || || || | |||| ||| ||| Sbjct 18542 GCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAG 18483 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 ||||| ||| || ||| || |||| || || | ||||| || | || || Sbjct 18482 TGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGAC 18423 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918 || |||||||| || |||| ||| || ||||| | ||| ||| || | ||| ||| Sbjct 18422 TGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCACGTTTTCACCGAAATCTCC 18363 Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTG-----TATTCTGAATG 78972 |||| ||||| || | |||| | | |||| | | |||| | ||||| || Sbjct 18362 CAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTA---TTTGCTCGATGTTCTGGATC 18306 Query 78973 GATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTT 79032 || || | |||| || | ||||| || || || | ||| | | ||| Sbjct 18305 GAGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGTGCGTGGTC 18246 Query 79033 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 79092 | | | | | || || | || || || ||||| || || |||| || | ||| || Sbjct 18245 AGATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTG 18186 Query 79093 TAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGAT 79152 |||| || ||||| || || | ||| || || || ||||||||||| || || || Sbjct 18185 TAAACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAA 18126 Query 79153 GCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCT 79212 ||||| ||||| || || | || | || | | ||||| | || || || Sbjct 18125 GCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCC 18066 Query 79213 TTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGA 79272 || || | |||||| ||| || || | ||| || ||||| | || || || ||| Sbjct 18065 TTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGA 18006 Query 79273 ATACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAA 79331 || || || || | || | || || ||| || || || ||||| |||| |||| | Sbjct 18005 ATGCCCTTGCTCACCGGA-GACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGGCCAT 17947 Query 79332 TTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATC 79391 || || || || || | || ||||| || ||||| || || |||| || |||||| | Sbjct 17946 CTCGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGAGCTT 17887 Query 79392 TTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTG 79451 || || || || || | || | | | || ||||| || || | || || Sbjct 17886 CTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTG 17827 Query 79452 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATA 79511 || || |||||||| || | || | | | || || | ||||| || | || || Sbjct 17826 GACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTA 17767 Query 79512 ATAATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCCTT 79568 | || | || ||||| || || | || | | || ||| ||| | || || || Sbjct 17766 GAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATT---TTGGCTACCTCTTT 17710 Query 79569 TAGTTTGAGAAAATCAAATCGTCCA-TCT-ATT--ACAAACATGTTCAACGCGACAGATG 79624 || || |||||| | ||| | || | | || |||||||||||||| | || | Sbjct 17709 CAGCTTCGCGAAATCATA-CGTACGGTCGGACTGGACGAACATGTTCAACGCAATCGAGG 17651 Query 79625 CCAGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATTTCAGTGCAGAG 79682 |||| || || || || || || | | || || || | | || || ||||| || Sbjct 17650 CCAGGTTGCACACCGCCACTTCGTC--CTTCGACGAGTACTCCACAATCTCGGTGCAAAG 17593 Query 79683 GTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 79742 |||| ||||| ||||| || | ||||| || || || || || ||||| ||||| Sbjct 17592 GTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGTCCTT 17533 Query 79743 ATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 79802 || || ||| |||| || || || | ||| ||||| || ||||| ||| | | Sbjct 17532 GTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACAGATC 17473 Query 79803 TCGAGCCTTTA--TTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT 79860 | ||||||| | || || | | || | || || || || || Sbjct 17472 CTGCGCCTTTACCTGGCGGA--TGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAACTTC 17415 Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 |||||||| || ||||| |||| | ||||| ||||| |||| || |||||||| | Sbjct 17414 TCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTC 17355 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 ||| | | | ||| || || | ||| || ||||| |||||||| || || || Sbjct 17354 CACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAGAAC 17295 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 | || | | | |||||| || || || || || || ||||| | ||| | | Sbjct 17294 ATGTCCCGTGCGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCAAAC 17235 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | ||| |||||||| |||| ||| ||||| | | ||||| || || || || ||| Sbjct 17234 ACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCC 17175 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 ||||| | ||| | || ||||| || || || | || ||| || | | || || || Sbjct 17174 TGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAA 17115 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 80218 | || || || |||||||| || |||| | || || || | | | || | | | Sbjct 17114 ATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCA--GCC 17057 Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278 | || || || || || ||||| | |||||| | || | ||| || |||||||| | Sbjct 17056 CGATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCTT 16997 Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 80338 | ||||| || || |||| | || ||||| || |||| ||| |||| || Sbjct 16996 CGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTAG 16937 Query 80339 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 80398 |||| || | ||| || || || || ||||| | || || || ||||| |||| Sbjct 16936 CCGCCGCGAACATGGTCGGCGAGGCATGGGTAAAGTAACGCTCCGAGAGCAGATTATACG 16877 Query 80399 TCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGT 80458 |||| || || | || || ||| ||| || || | ||||| ||||| | ||| | Sbjct 16876 TCTCGATCGCAGCCTCGATGTCCGTGCCATGGATGCCGATGGCGACGCGCATCAGCATAT 16817 Query 80459 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTT 80518 |||| || || || || |||||| || || |||||||| || || |||| |||| Sbjct 16816 GCTGCGGCCTCTCGACAATCTTGCCCTTGATCTTCAACAAATACGAACGCTCCAGGGTTT 16757 Query 80519 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 | || || ||||||||||| ||||| || |||||||||||| |||| || || Sbjct 16756 TGAAGCCGAAATAGTTGTACCCGAAGTCACGATCGTAAATAATAGCCGAATTTAG 16702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717960258658600