Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2173 268 1e-66 >seq2173 Length=41539 Score = 268 bits (296), Expect = 1e-66 Identities = 1176/1854 (63%), Gaps = 32/1854 (2%) Strand=Plus/Minus Query 70822 GCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAA 70881 |||| ||||| || | |||||||||||| || || || || | |||| ||| || Sbjct 18542 GCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAG 18483 Query 70882 TGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTT 70941 ||||| ||| || ||| ||| | || || || | ||| || || | |||||| Sbjct 18482 TGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGAC 18423 Query 70942 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 71001 || |||||||| || |||| ||| || ||||| | ||| ||| || | ||| ||| Sbjct 18422 TGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCACGTTTTCACCGAAATCTCC 18363 Query 71002 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTG-----TATTCTGAATG 71055 |||| ||||| || | |||| | | |||| | | |||| | ||||| || Sbjct 18362 CAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTA---TTTGCTCGATGTTCTGGATC 18306 Query 71056 GATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTT 71115 || || | || | || | || || || || || | ||| | | ||| Sbjct 18305 GAGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGTGCGTGGTC 18246 Query 71116 AAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTG 71175 | | | | | || || | || || || ||||| || || |||| || | || || Sbjct 18245 AGATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTG 18186 Query 71176 TAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 71235 |||| || |||||||| || | ||||| || || ||||||||||| || || || Sbjct 18185 TAAACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAA 18126 Query 71236 GCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGG--ATTTTAT 71293 || |||||||| || || | || || || | | ||| ||| | || || || | Sbjct 18125 GCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGT--TTGGCAATCTTTT 18068 Query 71294 CTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNN 71353 | || || | |||||||||| || |||| ||||| Sbjct 18067 CCTTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCA 18008 Query 71354 NNATGCCGTTACT-AGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCT 71412 ||||| || || | || | || || | || || ||||| ||||| || | |||| Sbjct 18007 GAATGCCCTTGCTCACCGGA-GACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGGCC 17949 Query 71413 AGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGA 71472 | || || || || || | || || || || ||||| || || |||| || |||||| Sbjct 17948 ATCTCGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGAGC 17889 Query 71473 TCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCT 71532 | || || |||| || || | || | | | || ||||| || || | || Sbjct 17888 TTCTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCC 17829 Query 71533 TGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGA 71592 || ||||| |||||||| || | ||| | | | || || | ||||| || | || Sbjct 17828 TGGACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGG 17769 Query 71593 TAATAATTAATATCTATAATTTTATTGAGATTTC---TGACTATTACTTTGACCACATCC 71649 || | || | || ||||| || || | || | | || ||| ||| | || || Sbjct 17768 TAGAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATT---TTGGCTACCTCT 17712 Query 71650 TTTAGTTTGAGAAAATCAAATCTCCCATCT-ATT--ACAAACACGTTCAAGGCAACAGAT 71706 || || || |||||| | | | || | | || |||| |||||| |||| || Sbjct 17711 TTCAGCTTCGCGAAATCATACGTACGGTCGGACTGGACGAACATGTTCAACGCAATCGAG 17652 Query 71707 GCCAGATTACAAACGGCTACCTCATTAGCATCGGCA--TATTGTATAATTTCAGTGCAAA 71764 ||||| || || || || || || | | ||| | || | | ||| || ||||||| Sbjct 17651 GCCAGGTTGCACACCGCCACTTCGTC--CTTCGACGAGTACTCCACAATCTCGGTGCAAA 17594 Query 71765 GATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCT 71824 | ||| ||||||||||| || | ||||| || || || || || ||||| |||| Sbjct 17593 GGTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGTCCT 17534 Query 71825 TATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGA 71884 | || || || |||| || || || | ||| ||||| || ||||| ||| | Sbjct 17533 TGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACAGAT 17474 Query 71885 CTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTT 71944 | | ||||||| || | | || | || || || || || | Sbjct 17473 CCTGCGCCTTTACCTGGCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAACTTCT 17414 Query 71945 CGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACC 72004 ||||||| || ||||| | || | | ||||| ||||| || | ||| |||||||| || Sbjct 17413 CGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCC 17354 Query 72005 ACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 72064 || | | | | | || || | ||| || ||||| |||||||| || || || | Sbjct 17353 ACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAGAACA 17294 Query 72065 GATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 72124 || | | | |||||| || || || || || || ||||| | ||| | | | Sbjct 17293 TGTCCCGTGCGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCAAACA 17234 Query 72125 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCT 72184 ||| |||||||| |||| ||| ||||| | | |||||||| || || || |||| Sbjct 17233 CATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCCT 17174 Query 72185 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 72244 |||| | ||| | || ||||| || || || | || ||| || | | || || || Sbjct 17173 GATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAAA 17114 Query 72245 CACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACC 72302 || || || |||||||| || |||| | || || || | ||| || | | || Sbjct 17113 TTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCA--GCCC 17056 Query 72303 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 72362 || || || || || ||||| | |||||| | || | ||| || |||||||| || Sbjct 17055 GATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCTTC 16996 Query 72363 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 72422 || || || || |||| | || ||||| || |||| ||| |||| || | Sbjct 16995 GATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTAGC 16936 Query 72423 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 72482 ||| || | ||| || || || || ||||| | || || || ||||| ||||| Sbjct 16935 CGCCGCGAACATGGTCGGCGAGGCATGGGTAAAGTAACGCTCCGAGAGCAGATTATACGT 16876 Query 72483 CTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATG 72542 ||| || || | || || ||| ||| || || | ||||| ||||| | |||||| Sbjct 16875 CTCGATCGCAGCCTCGATGTCCGTGCCATGGATGCCGATGGCGACGCGCATCAGCATATG 16816 Query 72543 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 72602 ||| || || || || |||||| || || |||||||| || || |||| ||||| Sbjct 16815 CTGCGGCCTCTCGACAATCTTGCCCTTGATCTTCAACAAATACGAACGCTCCAGGGTTTT 16756 Query 72603 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 || || ||||||||||| ||||| || |||||||||||| ||||||| || Sbjct 16755 GAAGCCGAAATAGTTGTACCCGAAGTCACGATCGTAAATAATAGCCGAATTTAG 16702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670850903767400