Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 102 8e-17
>seq2173
Length=41539
Score = 102 bits (112), Expect = 8e-17
Identities = 359/553 (65%), Gaps = 17/553 (3%)
Strand=Plus/Minus
Query 156176 GTGCGAAAATAGTACATGCCGGTTTTGAGGCCGCGCTTCCAACCGTACATGTGCACCGAC 156235
||||| |||||||||||||| || || ||||| |||||| ||| | ||||| ||||
Sbjct 18533 GTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAGTGCATCGAC 18474
Query 156236 GCCATTTTAGGCAAAGTAGGGTTT-GCCATGTACACGTTGAACGATTGACTTTGATCGAT 156294
| || || | | ||| |||| |||| || | ||||||||| || || |||||
Sbjct 18473 GTCAGCTT-GCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGACTGGTCGAT 18415
Query 156295 AAATGCTCCCCTGTCTGCTGCCATTTCAAT-CATATATTTTCCATTGTTCTCCCAAATTT 156353
|| || |||| ||| |||||||| | || || | || ||| || |||| |
Sbjct 18414 GAACGCACCCCGGTCGGCTGCCATCTGGATGCA---------CGTT-TTCACCGAAATCT 18365
Query 156354 CCCAGATTGTCATGTACAGCTTTTTTAGATTGTCGGGAATTTTGGCGATAGAAGCTATCG 156413
|||| | || ||||||| | | | | || |||| |||| ||||
Sbjct 18364 CCCAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGCTCGATGTTCTGGATCG 18305
Query 156414 ATCCTCTGTTTGCCATGATTGTTTTTCGCATACTATTTGTATAGAGATTTAATTTGATTA 156473
| || ||| |||| |||||| || |||| || | ||| || | |
Sbjct 18304 AGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGTGCGTGGTCA 18245
Query 156474 GATCATCGACCAAGTAGCGGTTGACAACTTGAAATTCGCCCGACAAAACACGTC--TCAA 156531
|||| | || || || | |||| || || ||||| |||||||||| ||| || | |
Sbjct 18244 GATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGT 18185
Query 156532 AAACAAATTACTGTGAAACGGTTCAAATGACTCGTTGTTGTTGAGTATTTGTGCGGTCGT 156591
|||| || || | |||| || || |||||||||||| | |||||||| ||||
Sbjct 18184 AAACGTTGGAC-GT-ATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGA 18127
Query 156592 GGCCGTCGGCATGTACGCCACAAGCAATGAATTACGTAATCCGTATTTTTGTATATTTAT 156651
||||||||||| ||| | |||| ||| || || | |||| ||| || |||
Sbjct 18126 AGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTC 18067
Query 156652 TTTCAACTGTGACCAGTCCCATAACGAAGTCGGTACCGTATTCCACAAATCGTATTGCAA 156711
|||| | | ||| | ||| | ||||||||| | ||||||| ||||| ||||
Sbjct 18066 CTTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAG 18007
Query 156712 TATTCCTTCGCTC 156724
|| || | ||||
Sbjct 18006 AATGCCCTTGCTC 17994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506796605626800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |