Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2173 102 8e-17 >seq2173 Length=41539 Score = 102 bits (112), Expect = 8e-17 Identities = 359/553 (65%), Gaps = 17/553 (3%) Strand=Plus/Minus Query 156176 GTGCGAAAATAGTACATGCCGGTTTTGAGGCCGCGCTTCCAACCGTACATGTGCACCGAC 156235 ||||| |||||||||||||| || || ||||| |||||| ||| | ||||| |||| Sbjct 18533 GTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAGTGCATCGAC 18474 Query 156236 GCCATTTTAGGCAAAGTAGGGTTT-GCCATGTACACGTTGAACGATTGACTTTGATCGAT 156294 | || || | | ||| |||| |||| || | ||||||||| || || ||||| Sbjct 18473 GTCAGCTT-GCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGACTGGTCGAT 18415 Query 156295 AAATGCTCCCCTGTCTGCTGCCATTTCAAT-CATATATTTTCCATTGTTCTCCCAAATTT 156353 || || |||| ||| |||||||| | || || | || ||| || |||| | Sbjct 18414 GAACGCACCCCGGTCGGCTGCCATCTGGATGCA---------CGTT-TTCACCGAAATCT 18365 Query 156354 CCCAGATTGTCATGTACAGCTTTTTTAGATTGTCGGGAATTTTGGCGATAGAAGCTATCG 156413 |||| | || ||||||| | | | | || |||| |||| |||| Sbjct 18364 CCCAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGCTCGATGTTCTGGATCG 18305 Query 156414 ATCCTCTGTTTGCCATGATTGTTTTTCGCATACTATTTGTATAGAGATTTAATTTGATTA 156473 | || ||| |||| |||||| || |||| || | ||| || | | Sbjct 18304 AGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGTGCGTGGTCA 18245 Query 156474 GATCATCGACCAAGTAGCGGTTGACAACTTGAAATTCGCCCGACAAAACACGTC--TCAA 156531 |||| | || || || | |||| || || ||||| |||||||||| ||| || | | Sbjct 18244 GATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGT 18185 Query 156532 AAACAAATTACTGTGAAACGGTTCAAATGACTCGTTGTTGTTGAGTATTTGTGCGGTCGT 156591 |||| || || | |||| || || |||||||||||| | |||||||| |||| Sbjct 18184 AAACGTTGGAC-GT-ATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGA 18127 Query 156592 GGCCGTCGGCATGTACGCCACAAGCAATGAATTACGTAATCCGTATTTTTGTATATTTAT 156651 ||||||||||| ||| | |||| ||| || || | |||| ||| || ||| Sbjct 18126 AGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTC 18067 Query 156652 TTTCAACTGTGACCAGTCCCATAACGAAGTCGGTACCGTATTCCACAAATCGTATTGCAA 156711 |||| | | ||| | ||| | ||||||||| | ||||||| ||||| |||| Sbjct 18066 CTTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAG 18007 Query 156712 TATTCCTTCGCTC 156724 || || | |||| Sbjct 18006 AATGCCCTTGCTC 17994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506796605626800