Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq16628 95.1 3e-14 seq426 95.1 3e-14 >seq16628 Length=122787 Score = 95.1 bits (104), Expect = 3e-14 Identities = 177/260 (68%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 165095 ACCGATAAGGATGAATGGAATACTTGGAATAAAATACACGATCCTGTTTTACATATAGAG 165154 |||||| |||| |||||| | ||| | || | |||||| || | ||||| ||| Sbjct 10135 ACCGATCAGGACGAATGGTCGTCCTGGCAGAAGCGAGGCGATCCGGTGCTGCATATCGAG 10194 Query 165155 CTAAGAAGATGGGCAGATATGATGTTGATAGCACCCTTAACAGCAAACAGTTTAGCGAAG 165214 || || | ||||| ||| || | ||||||| || | || |||||| | |||||| Sbjct 10195 CTCAGTAAGTGGGCCGATCTGCTCGTGATAGCGCCGCTCGATGCGAACAGTCTGGCGAAG 10254 Query 165215 ATAGCTAACGGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGAATATTAAT 165274 || || | ||| | || | |||||| | ||||| | || ||| || | Sbjct 10255 ATGGCGAGCGGGCTGTGCGACAACTTGCTGCTGTGTACGACCCGCGCCTGGGATCCGGAC 10314 Query 165275 AAACCTTTACTTTTCTGTCCAGCTATGAATACACTTATGTGGGAACATCCTATTACTGAG 165334 ||||| || || ||||||||||| ||||| || | |||||| ||||||| || || | | Sbjct 10315 AAACCGTTGCTCTTCTGTCCAGCCATGAACACGCGCATGTGGCAACATCCGATCACCGGG 10374 Query 165335 CAGCATATAGAAACTCTTAA 165354 || || || || || ||||| Sbjct 10375 CACCAGATCGAGACACTTAA 10394 >seq426 Length=85602 Score = 95.1 bits (104), Expect = 3e-14 Identities = 177/260 (68%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 165095 ACCGATAAGGATGAATGGAATACTTGGAATAAAATACACGATCCTGTTTTACATATAGAG 165154 |||||| |||| |||||| | ||| | || | |||||| || | ||||| ||| Sbjct 84570 ACCGATCAGGACGAATGGTCGTCCTGGCAGAAGCGAGGCGATCCGGTGCTGCATATCGAG 84629 Query 165155 CTAAGAAGATGGGCAGATATGATGTTGATAGCACCCTTAACAGCAAACAGTTTAGCGAAG 165214 || || | ||||| ||| || | ||||||| || | || |||||| | |||||| Sbjct 84630 CTCAGTAAGTGGGCCGATCTGCTCGTGATAGCGCCGCTCGATGCGAACAGTCTGGCGAAG 84689 Query 165215 ATAGCTAACGGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGAATATTAAT 165274 || || | ||| | || | |||||| | ||||| | || ||| || | Sbjct 84690 ATGGCGAGCGGGCTGTGCGACAACTTGCTGCTGTGTACGACCCGCGCCTGGGATCCGGAC 84749 Query 165275 AAACCTTTACTTTTCTGTCCAGCTATGAATACACTTATGTGGGAACATCCTATTACTGAG 165334 ||||| || || ||||||||||| ||||| || | |||||| ||||||| || || | | Sbjct 84750 AAACCGTTGCTCTTCTGTCCAGCCATGAACACGCGCATGTGGCAACATCCGATCACCGGG 84809 Query 165335 CAGCATATAGAAACTCTTAA 165354 || || || || || ||||| Sbjct 84810 CACCAGATCGAGACACTTAA 84829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150891437485420