Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq9255 167 4e-37
seq24829 158 2e-34
seq15346 158 2e-34
seq21943 152 8e-33
seq14010 152 8e-33
>seq9255
Length=141020
Score = 167 bits (184), Expect = 4e-37
Identities = 182/242 (75%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | || || ||||||||||| |||||||||||||| || |||
Sbjct 119691 GCCAAGCGTCACCGGAAGGTGCTGCGCGATAACATCCAGGGAATCACCAAGCCGGCCATC 119750
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||||||||| ||||||||||| |||||| |||| || || | || || || |
Sbjct 119751 CGTCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATCTCCGGCCTGATTTACGAGGAAACC 119810
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| ||||| | |||||| ||| ||| |||| || ||| | || ||||||
Sbjct 119811 CGCGGTGTGCTGAAGGTGTTCCTCGAGAACGTCATCCGCGACGCTGTGACGTACACCGAG 119870
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| |||||| ||||||| | || || || |||| || || ||
Sbjct 119871 CACGCCAAGCGGAAGACGGTCACCGCCATGGACGTGGTGTACGCCCTGAAGCGCCAGGGT 119930
Query 16673 CG 16674
||
Sbjct 119931 CG 119932
Score = 167 bits (184), Expect = 4e-37
Identities = 182/242 (75%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | || || ||||||||||| |||||||||||||| || |||
Sbjct 121751 GCCAAGCGTCACCGGAAGGTGCTGCGCGATAACATCCAGGGAATCACCAAGCCGGCCATC 121692
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||||||||| ||||||||||| |||||| |||| || || | || || || |
Sbjct 121691 CGTCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATCTCCGGCCTGATTTACGAGGAAACC 121632
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| ||||| | |||||| ||| ||| |||| || ||| | || ||||||
Sbjct 121631 CGCGGTGTGCTGAAGGTGTTCCTCGAGAACGTCATCCGCGACGCTGTGACGTACACCGAG 121572
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| |||||| ||||||| | || || || |||| || || ||
Sbjct 121571 CACGCCAAGCGGAAGACGGTCACCGCCATGGACGTGGTGTACGCCCTGAAGCGCCAGGGT 121512
Query 16673 CG 16674
||
Sbjct 121511 CG 121510
Score = 167 bits (184), Expect = 4e-37
Identities = 182/242 (75%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | || || ||||||||||| |||||||||||||| || |||
Sbjct 123652 GCCAAGCGTCACCGGAAGGTGCTGCGCGATAACATCCAGGGAATCACCAAGCCGGCCATC 123711
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||||||||| ||||||||||| |||||| |||| || || | || || || |
Sbjct 123712 CGTCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATCTCCGGCCTGATTTACGAGGAAACC 123771
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| ||||| | |||||| ||| ||| |||| || ||| | || ||||||
Sbjct 123772 CGGGGTGTGCTGAAGGTGTTCCTCGAGAACGTCATCCGCGACGCTGTGACGTACACCGAG 123831
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| |||||| ||||||| | || || || |||| || || ||
Sbjct 123832 CACGCCAAGCGGAAGACGGTCACCGCCATGGACGTGGTGTACGCCCTGAAGCGCCAGGGT 123891
Query 16673 CG 16674
||
Sbjct 123892 CG 123893
Score = 82.4 bits (90), Expect = 1e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | || || ||||||||||| |||||||||||||| || |||
Sbjct 124704 GCCAAGCGTCACCGGAAGGTGCTGCGCGATAACATCCAGGGAATCACCAAGCCGGCCATC 124763
Query 16493 CGTCGTCTGGCTCGTCGTGG 16512
|||||||||||||| |||||
Sbjct 124764 CGTCGTCTGGCTCGCCGTGG 124783
>seq24829
Length=3243
Score = 158 bits (174), Expect = 2e-34
Identities = 195/267 (73%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | || || || |||||||| || ||||||||||| || |||
Sbjct 1764 GCCAAGCGTCACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATC 1705
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| |||||||| || || ||||| |||| || || |||| || ||||
Sbjct 1704 CGGCGTCTGGCCCGTCGTGGCGGCGTGAAGCGCATCTCCGGGCTGATCTACGAGGAGACG 1645
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | || ||||| | ||||| ||| ||| |||| || || || ||| ||||||
Sbjct 1644 CGCGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 1585
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| |||||| ||||||| |||| || || |||| || || |||
Sbjct 1584 CACGCCAAGCGCAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGCCAGGGC 1525
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | | || || || ||| | |||
Sbjct 1524 CGCACGCTGTACGGCTTCGGAGGCTAA 1498
>seq15346
Length=25906
Score = 158 bits (174), Expect = 2e-34
Identities = 195/267 (73%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | || || || |||||||| || ||||||||||| || |||
Sbjct 13760 GCCAAGCGTCACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATC 13819
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| |||||||| || || ||||| |||| || || |||| || ||||
Sbjct 13820 CGGCGTCTGGCCCGTCGTGGCGGCGTGAAGCGCATCTCCGGGCTGATCTACGAGGAGACG 13879
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | || ||||| | ||||| ||| ||| |||| || || || ||| ||||||
Sbjct 13880 CGCGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 13939
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| |||||| ||||||| |||| || || |||| || || |||
Sbjct 13940 CACGCCAAGCGCAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGCCAGGGC 13999
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | | || || || ||| | |||
Sbjct 14000 CGCACGCTGTACGGCTTCGGAGGCTAA 14026
Score = 158 bits (174), Expect = 2e-34
Identities = 195/267 (73%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | || || || |||||||| || ||||||||||| || |||
Sbjct 21898 GCCAAGCGTCACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATC 21957
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| |||||||| || || ||||| |||| || || |||| || ||||
Sbjct 21958 CGGCGTCTGGCCCGTCGTGGCGGCGTGAAGCGCATCTCCGGGCTGATCTACGAGGAGACG 22017
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | || ||||| | ||||| ||| ||| |||| || || || ||| ||||||
Sbjct 22018 CGCGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 22077
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| |||||| ||||||| |||| || || |||| || || |||
Sbjct 22078 CACGCCAAGCGCAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGCCAGGGC 22137
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | | || || || ||| | |||
Sbjct 22138 CGCACGCTGTACGGCTTCGGAGGCTAA 22164
Score = 158 bits (174), Expect = 2e-34
Identities = 195/267 (73%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | || || || |||||||| || ||||||||||| || |||
Sbjct 25144 GCCAAGCGTCACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATC 25203
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| |||||||| || || ||||| |||| || || |||| || ||||
Sbjct 25204 CGGCGTCTGGCCCGTCGTGGCGGCGTGAAGCGCATCTCCGGGCTGATCTACGAGGAGACG 25263
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | || ||||| | ||||| ||| ||| |||| || || || ||| ||||||
Sbjct 25264 CGCGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 25323
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| |||||| ||||||| |||| || || |||| || || |||
Sbjct 25324 CACGCCAAGCGCAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGCCAGGGC 25383
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | | || || || ||| | |||
Sbjct 25384 CGCACGCTGTACGGCTTCGGAGGCTAA 25410
>seq21943
Length=2924
Score = 152 bits (168), Expect = 8e-33
Identities = 194/267 (73%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | || || || |||||||| || ||||||||||| || |||
Sbjct 697 GCCAAGCGTCACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATC 756
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| |||||||| || || ||||| |||| || || |||| || ||||
Sbjct 757 CGGCGTCTGGCCCGTCGTGGCGGCGTGAAGCGCATCTCCGGGCTGATCTACGAGGAGACG 816
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | || ||||| | ||||| ||| ||| |||| || || || ||| ||||||
Sbjct 817 CGCGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 876
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||| | || || ||||| |||||| ||||||| |||| || || |||| || || |||
Sbjct 877 CACCCCAAGCGCAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGCCAGGGC 936
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | | || || || ||| | |||
Sbjct 937 CGCACGCTGTACGGCTTCGGAGGCTAA 963
>seq14010
Length=2961
Score = 152 bits (168), Expect = 8e-33
Identities = 194/267 (73%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | || || || |||||||| || ||||||||||| || |||
Sbjct 2531 GCCAAGCGTCACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATC 2472
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| |||||||| || || ||||| |||| || || |||| || ||||
Sbjct 2471 CGGCGTCTGGCCCGTCGTGGCGGCGTGAAGCGCATCTCCGGGCTGATCTACGAGGAGACG 2412
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | || ||||| | ||||| ||| ||| |||| || || || ||| ||||||
Sbjct 2411 CGCGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 2352
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||| | || || ||||| |||||| ||||||| |||| || || |||| || || |||
Sbjct 2351 CACCCCAAGCGCAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGCCAGGGC 2292
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | | || || || ||| | |||
Sbjct 2291 CGCACGCTGTACGGCTTCGGAGGCTAA 2265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79043779839945
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