Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2173 340 2e-88 >seq2173 Length=41539 Score = 340 bits (376), Expect = 2e-88 Identities = 1196/1832 (65%), Gaps = 52/1832 (3%) Strand=Plus/Minus Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799 || ||||| |||||||||||||||||||| || || || ||| ||| | || | | Sbjct 18542 GCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAG 18483 Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859 || |||||||||| | |||| | || |||||||| | || | ||| || Sbjct 18482 TGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGAC 18423 Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTCATT-TC 144918 || || ||||| || |||||||| ||||||| || |||||| || | | || Sbjct 18422 TGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGC-ACGTTTTCACCGAAATCTC 18364 Query 144919 CCAAGCGGTCTTGTACAAA-CGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATCG 144977 |||| | || ||||||| | || | | | | ||| || || || ||| |||| Sbjct 18363 CCAAACCGTTTTGTACAGATCGCGCACT-TCCTTCGGTATTTGCTCGATGTTCTGGATCG 18305 Query 144978 ACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGT-ACAGTTTTAACTTGATC 145036 | || ||||| || | || | |||| ||| || ||| |||| | || || Sbjct 18304 AGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCAT-CGTCCCACAGACCGTGCGTGGTC 18246 Query 145037 AAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAA 145096 | || | || | || || || || |||||||||||||| | || || || || Sbjct 18245 AGATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTG 18186 Query 145097 TACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTT 145156 || ||||| ||||| | || || || |||||||| ||||||| ||||| || |||| Sbjct 18185 TAAACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAA 18126 Query 145157 GCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCC 145216 || || ||||| ||| | || | ||| ||||||| ||||| || || | |||| Sbjct 18125 GCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCC 18066 Query 145217 TTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAA 145276 || ||||| |||||| ||| || ||||| | || ||||||||||||||||| | Sbjct 18065 TTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGA 18006 Query 145277 ATGCCCTCGCTGGCGGG-GCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTT-GGCGA 145334 ||||||| ||| | || | ||| | | | | ||| | | ||| | ||| | Sbjct 18005 ATGCCCTTGCTCACCGGAGACCCCTCGTACGTCTC-GTA-CGGTCCCTCCTGGGCGGCCA 17948 Query 145335 GCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCA 145394 |||||| || || ||||| || ||| | || || ||||| || ||| |||||| Sbjct 17947 TCTCGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGAGCT 17888 Query 145395 GCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCT 145454 | ||| || | ||||||||||| | || || || | || ||||| || | |||| Sbjct 17887 TCTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCT 17828 Query 145455 GTATTCCCACGCCGATGGGCCGATGTTTCATGTT---GCTCATCCTCGCCGACTC--GAT 145509 | | || | ||||| || || || |||||| || | || ||| | | | | Sbjct 17827 GGACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGT 17768 Query 145510 AGGATATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTG 145569 || | || ||| |||||||| || |||||||| ||| || | || | | | Sbjct 17767 AGAAGTTC----ACG-TCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTC 17713 Query 145570 CCGCAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGAT 145629 || ||| | || ||| || | ||| ||| | ||| | || | || || Sbjct 17712 TTTCAGCTTCGCGAAATCATACGTACGGTCGGACTGGACGA-ACA--TGTTCAACGCAAT 17656 Query 145630 CGACGCCAAATTACAAACTGCCGTCTCCTCGG-CGTCGCTGTATTGTACGATCTCGGCGC 145688 ||| |||| || || || ||| || || || || ||| | || ||||||| || Sbjct 17655 CGAGGCCAGGTTGCACACCGCCACTTCGTCCTTCGACGA-GTACTCCACAATCTCGGTGC 17597 Query 145689 ACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGT 145748 | | || || |||||||| || | |||||||| || ||||| | |||||||||| Sbjct 17596 AAAGGTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGT 17537 Query 145749 CCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTG 145806 ||||||| |||||||||||| |||| ||||||||||| | || | ||| |||| Sbjct 17536 CCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAAC--CA 17479 Query 145807 CAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAG 145866 || |||||||| ||||| | | |||||||||| | || || | |||| | Sbjct 17478 CAGATCCTGCGCCTTTACCTGGCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAA 17419 Query 145867 CTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAG 145926 || ||| ||| | || | |||||| || |||||||| | || || ||||||| Sbjct 17418 CTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAA 17359 Query 145927 CGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTA 145986 ||| |||| || | ||||||| ||| |||| ||| || | ||| |||||||| Sbjct 17358 ACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTA 17299 Query 145987 CATCAAGTCGCGCGCTTTGCA-ATCCTCAGCACCCATGTTTCGCTTCAAAT-TAAGCACA 146044 | || ||| || || ||| ||||| || ||||| ||||| || || || Sbjct 17298 GAACATGTCCCGTGC-GCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACT 17240 Query 146045 CTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTG 146101 | | | | || |||||||||| || | |||| ||| | || || || ||| Sbjct 17239 C-AAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTG 17181 Query 146102 CCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCG 146161 || ||||| || |||| ||| || ||||||| | ||||||| ||| ||| | | ||| Sbjct 17180 CCGCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCG 17121 Query 146162 CTGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTC 146221 | | | |||||||| | || || || | || | ||| || || ||| Sbjct 17120 TTCGAAATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTC 17061 Query 146222 ACGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATG 146281 | |||| || ||| | ||||||| || ||||| | ||||| ||||||||| Sbjct 17060 AGCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATG 17001 Query 146282 CCGTCAATGCTATCGCTTCGA-ATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG 146340 || || ||||| ||| | || ||| ||||||||||| || ||| ||| | | | Sbjct 17000 CCTTCGATGCTGTCG-TCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTG 16942 Query 146341 CGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTC----ATCA 146396 ||| |||||| ||||| ||||| || || ||||| | |||| | || Sbjct 16941 CGTAGCCGCCGCGAACATGGTCGGCGAGGCATGGGTAAA----GTAACGCTCCGAGAGCA 16886 Query 146397 TCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCA 146456 |||||| ||||| || | | ||||| |||||| ||||| | |||||||||| Sbjct 16885 GATTATACGTCTCGATCGCAGCCTCGATGTCCGTGCCATGGATGCCGATGGCGACGCGCA 16826 Query 146457 TGAGCATGTGTTGGGGCCGCTCCGCCA-CTTG--ATTGTCAATCTTTAACAAATAGCCGT 146513 | ||||| || || |||| ||| | | |||| ||| ||||| |||||||| Sbjct 16825 TCAGCATATGCTGCGGCCTCTCGACAATCTTGCCCTTG---ATCTTCAACAAATACGAAC 16769 Query 146514 TCTCCAGGGTTTTGTATCCGAAAAATTTGTAC 146545 ||||||||||||| | |||||| | |||||| Sbjct 16768 GCTCCAGGGTTTTGAAGCCGAAATAGTTGTAC 16737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471810041001600