Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq7262 188 5e-43
seq11601 95.1 8e-15
seq9235 95.1 8e-15
>seq7262
Length=177403
Score = 188 bits (208), Expect = 5e-43
Identities = 169/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221
|||| ||| | ||||| || ||||| ||| | || ||||||||| ||||| |||||
Sbjct 142374 ATGGCTACCGTAAACGTGAACCGTAACGTGACCGATATGTTCTACCGGTACAAGATGCCT 142433
Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281
|||||| |||||||| |||||||| |||||||| || || || || || || ||||||
Sbjct 142434 CGCATCAATGCCAAGGTAGAGGGTAAAGGAAACGGCATCAAGACGGTGATCGTGAACATG 142493
Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341
| ||||| |||| ||| |||| ||||| |||||||| ||||| || || ||||| |||
Sbjct 142494 GCGGAAGTGGCTAGAGCGATCGGTCGCCCCGCCACCTATCCGACCAAGTACTTCGGTTGC 142553
Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373
|||||||| ||||||||||| ||||| |||||
Sbjct 142554 GAACTTGGAGCTCAGACGCAATTTGACCACAA 142585
Score = 188 bits (208), Expect = 5e-43
Identities = 169/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221
|||| ||| | ||||| || ||||| ||| | || ||||||||| ||||| |||||
Sbjct 148733 ATGGCTACCGTAAACGTGAACCGTAACGTGACCGATATGTTCTACCGGTACAAGATGCCT 148792
Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281
|||||| |||||||| |||||||| |||||||| || || || || || || ||||||
Sbjct 148793 CGCATCAATGCCAAGGTAGAGGGTAAAGGAAACGGCATCAAGACGGTGATCGTGAACATG 148852
Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341
| ||||| |||| ||| |||| ||||| |||||||| ||||| || || ||||| |||
Sbjct 148853 GCGGAAGTGGCTAGAGCGATCGGTCGCCCCGCCACCTATCCGACCAAGTACTTCGGTTGC 148912
Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373
|||||||| ||||||||||| ||||| |||||
Sbjct 148913 GAACTTGGAGCTCAGACGCAATTTGACCACAA 148944
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
||||| |||||||| || ||||| |||| | | |||||||||||||| | || ||
Sbjct 142969 AACGAACGCTTCATTGTGAACGGTGCGCACGATGCCACCAAGCTGCAGGACCTGCTCGAT 143028
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATT 6494
|| || |||||| ||| || ||||| | ||| ||||||||||||||||| || || ||
Sbjct 143029 GGATTCATTCGCCGGTTCGTCCTGTGCCCGGAGTGCGATAACCCGGAGACGGACCTGATA 143088
Query 6495 GTGTCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAG 6554
|| || | |||| || ||||| ||||| ||||| |||||||| | ||| || |
Sbjct 143089 GTTTCGTCGAAGAAGGGTACGATCTCGCAGGGATGCAAGGCGTGCGGCTTCCACGGTCCG 143148
Query 6555 CTGGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC 6601
|| || | ||||| | ||||| ||||| | ||||| || ||
Sbjct 143149 CTCGAGGTCAACCACAAGGTGAACACGTTCATCATCAAGAACCCGCC 143195
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
||||| |||||||| || ||||| |||| | | |||||||||||||| | || ||
Sbjct 149328 AACGAACGCTTCATTGTGAACGGTGCGCACGATGCCACCAAGCTGCAGGACCTGCTCGAT 149387
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATT 6494
|| || |||||| ||| || ||||| | ||| ||||||||||||||||| || || ||
Sbjct 149388 GGATTCATTCGCCGGTTCGTCCTGTGCCCGGAGTGCGATAACCCGGAGACGGACCTGATA 149447
Query 6495 GTGTCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAG 6554
|| || | |||| || ||||| ||||| ||||| |||||||| | ||| || |
Sbjct 149448 GTTTCGTCGAAGAAGGGTACGATCTCGCAGGGATGCAAGGCGTGCGGCTTCCACGGTCCG 149507
Query 6555 CTGGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC 6601
|| || | ||||| | ||||| ||||| | ||||| || ||
Sbjct 149508 CTCGAGGTCAACCACAAGGTGAACACGTTCATCATCAAGAACCCGCC 149554
>seq11601
Length=7614
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||| ||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 2324 CTCTCTATTCAGAGTGCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCAT 2383
Query 20007 GGTAATATTTAGCCTTA 20023
|| |||||||| |||
Sbjct 2384 GGCGGTATTTAGCTTTA 2400
>seq9235
Length=820
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||| ||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 495 CTCTCTATTCAGAGTGCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCAT 436
Query 20007 GGTAATATTTAGCCTTA 20023
|| |||||||| |||
Sbjct 435 GGCGGTATTTAGCTTTA 419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334806916262315
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |